Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq63568 628 3e-175 seq65592 143 3e-29 seq47049 132 6e-26 seq70055 86.0 8e-12 >seq63568 Length=1222 Score = 628 bits (696), Expect = 3e-175 Identities = 736/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 |||||| | ||||| ||||||||| | ||||| || || | || |||||||| | Sbjct 1084 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1025 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313 |||||| || || | ||| | ||||| |||| || || | || ||| | ||||| | Sbjct 1024 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373 |||| || || || || || || || || || ||| |||| || || | || ||||||| Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433 | || || |||||||| || ||||| |||| || || || | ||||| || || | Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 846 Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493 | |||||||| ||||| | ||||| ||| | || || ||||||||||| |||| | | Sbjct 845 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 786 Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553 | | |||||| | |||| || || ||||||||||||||||||||| | || | Sbjct 785 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC 726 Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613 |||| |||||||| |||||||| |||||| ||| || || || || ||||| || | Sbjct 725 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTG 666 Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673 | || ||| || |||| || | |||||||| ||| ||||||||||| || || | Sbjct 665 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 606 Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733 || ||| || || |||| |||| |||| || || || ||||| || || || ||||||| Sbjct 605 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACC 546 Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793 | || |||||| | ||||| |||||||| ||||| || || || |||||||| ||||||| Sbjct 545 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 486 Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852 |||| |||| ||||| | | | | || | |||||||| || ||| || || | Sbjct 485 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 427 Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||| Sbjct 426 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTT 367 Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972 || || |||||||||| |||||| || ||||||||||| ||| | || |||||||| Sbjct 366 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTA 307 Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032 ||||||||||| || || || ||||||||||| || | ||| | ||||||||||| || Sbjct 306 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTC 247 Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092 || | |||||||| || || ||||| || | ||||| ||||||||||||| | || Sbjct 246 AATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 187 Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152 |||||||| || || | ||||||||| ||||| |||||||| ||||| || |||||| Sbjct 186 ACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 127 Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGC 184181 ||||| || |||||||| ||||| ||||| Sbjct 126 GCTCATAATTTCCCTCTAGACCTAGCTGC 98 >seq65592 Length=292 Score = 143 bits (158), Expect = 3e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 186780 GGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAG 186839 ||||| || || ||||| ||||| ||||||||||| ||| || | | |||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 186840 GATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCC 186899 |||||||| || ||||| ||||| ||||| ||||| || || || |||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 186900 TGGATGGCACCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCA 186959 |||||||| | ||||| || ||||||||| || |||| ||||| || || | ||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 186960 AGAGGCAACGCTCT 186973 | || |||||||| Sbjct 198 CGTGGAAACGCTCT 211 >seq47049 Length=776 Score = 132 bits (146), Expect = 6e-26 Identities = 173/238 (73%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038 ||||||||| | || ||| || |||||||| ||||||||||| ||| ||||| | Sbjct 488 TTTGAATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTC 429 Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098 || || || | |||||| ||||||| | |||||||| ||| ||| ||||| Sbjct 428 CCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAA 369 Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTG 171158 ||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||| Sbjct 368 GTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTT 309 Query 171159 ACCTGCGTCTCATATCCTACAAGTGATTGTGTAATCTTGACTGAACAGGAAG-AGAAC 171215 || || || | ||||||| |||| ||| || |||| | |||||| ||||| Sbjct 308 ACTTGTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCACAAGGAAGAAGAAC 251 >seq70055 Length=284 Score = 86.0 bits (94), Expect = 8e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| ||||| |||||||| ||||| || || | || | Sbjct 232 TGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGTCTATTGCTCT 173 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| || ||| | || | || || ||| | || || || || ||||| || | Sbjct 172 TTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTTGTAACTTCAT 113 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 ||||||| || || ||||| ||| || | || ||| ||| || | || ||||||| Sbjct 112 GGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACTGCAGCAG 53 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 186202 | || ||||||||| | | | | || ||| | | |||| |||||||| Sbjct 52 TCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621489860575080