Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq63568 605 3e-168 seq65592 147 3e-30 seq67767 136 5e-27 seq47049 116 4e-21 seq70055 107 2e-18 seq56135 104 3e-17 >seq63568 Length=1222 Score = 605 bits (670), Expect = 3e-168 Identities = 730/988 (74%), Gaps = 4/988 (0%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| ||| | || ||||| || | || ||||| ||||| || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||||||| | ||||| || Sbjct 1023 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 965 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || ||||| || || |||| || || | || || ||||| Sbjct 964 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 905 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||||||||| || ||||| ||||| ||||| ||| | ||||| || || || Sbjct 904 TATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 845 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| || || | ||||| ||| | |||||||||||||||| |||| || | Sbjct 844 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 785 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | |||||| | | ||| | | |||||||||||||||||||||||| || || Sbjct 784 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 725 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || |||||||| || ||||| ||| ||||| || ||||| ||||| || || |||| Sbjct 724 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGC 665 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 || ||| | | || || | |||||||| || || || | |||||| || || || Sbjct 664 AGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 605 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 | ||| || ||||||| ||| |||| || || || ||||| || || || |||||||| Sbjct 604 CTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCC 545 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| || || |||||||| || || || || || |||||||| |||||||| Sbjct 544 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGG 485 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 ||| |||| ||||| | | | | || | |||||||| || || ||| | || | | Sbjct 484 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 426 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 |||||| ||||||||||| ||||| ||||| || || || |||||||| ||||| || | Sbjct 425 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTG 366 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || ||||||||||||| || |||||||| || || || | || |||||||| | Sbjct 365 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAG 306 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || |||||||| || ||||||||||| || || | ||| | ||||| ||||| |||| Sbjct 305 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCA 246 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 | | || |||||||| || ||||| || | | |||||||| || || | || | Sbjct 245 ATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 186 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 ||||||| || || | ||||||||| |||||||||||||| ||||| || ||||||| Sbjct 185 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 126 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGC 178583 |||| || |||||||| ||||| ||||| Sbjct 125 CTCATAATTTCCCTCTAGACCTAGCTGC 98 >seq65592 Length=292 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 179658 GGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAG 179717 ||||| || || ||||| | || |||||||||||||| ||||| ||| | || ||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 179718 GATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCT 179777 |||||||| || ||||| ||||| ||||| || || || || || |||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 179778 TGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCA 179837 |||||||| | ||||| || ||||||||| || |||| ||||| || || | ||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 179838 AGAGGCAACGCTCT 179851 | || |||||||| Sbjct 198 CGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 136 bits (150), Expect = 5e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 179092 GAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTGGCGCTCCACGGTG 179151 ||||||| ||| ||| ||| | || || || ||| ||||||| || || ||||||| Sbjct 1 GAGATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTG 60 Query 179152 CCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG-TCTAGTCGGTATT 179210 | |||| | |||||||| ||| | || || |||||| | || || ||| || | | Sbjct 61 CTTTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TG 119 Query 179211 CGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTC 179270 || ||||| ||||||||||| || || |||||||||||||| ||||| ||||| || || Sbjct 120 CGGCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTG 179 Query 179271 ATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTG 179304 || ||||| || || ||||| |||||||||| Sbjct 180 ATTTATCCACTGGGCCAGTCTGGTTGGTTCTTTG 213 >seq47049 Length=776 Score = 116 bits (128), Expect = 4e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 176151 TTTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTC 176210 ||||| ||| | || ||| || ||||| || |||||| |||| ||| |||| ||| Sbjct 488 TTTGAATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTC 429 Query 176211 AACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACG 176270 ||||| ||| | |||||| | ||||| ||||| || ||| | | || Sbjct 428 CCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAA 369 Query 176271 GTAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTG 176330 || |||||| ||| || |||||||||||||||||||| || | ||||| |||| Sbjct 368 GTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTT 309 Query 176331 ACTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 176389 ||||||||| | ||||||| | ||| ||| ||||||||| | || ||||| ||||| Sbjct 308 ACTTGTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCACAAGGAAGAAGAACT 250 >seq70055 Length=284 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || || |||||||| |||||||| ||| Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| || || | || |||| |||||| |||| || || || || Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || ||||||||||| || | || ||| ||| | || || ||||| ||| | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 179019 ACTGCTGCTGTATCAACTCCTGCT 179042 ||||| || || || ||||||||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTGCT 39 >seq56135 Length=966 Score = 104 bits (114), Expect = 3e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 176172 TATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGCGCTGGT 176231 || || || ||||| || ||| | ||||| ||||||||| ||||||||||| ||||| Sbjct 377 TACATCCTAGATGCAGCGGAGAATGCAGGGGTTGAACTCCCTTACTCGTGCCGTGCTGGA 436 Query 176232 GCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGATCAATCG 176291 || || || | |||||| ||||| | | || ||| | || |||||| ||| || Sbjct 437 GCGTGCTCTACTTGTGCTGGAAAGGTTGTTTCTGGCTCAGTCGATCAATCTGATGGCTCT 496 Query 176292 TTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATATCCTACG 176351 ||| | || ||| || | | | ||| || | || || |||||||||||||| || Sbjct 497 TTCTTGGACGATACTCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCATATCCAACT 556 Query 176352 AGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTATTGA 176396 |||||||| || | ||| | || |||| |||||||| ||| Sbjct 557 GCTGATTGTGTTATCCAAACTCACAAGGAAGGTGAACTTTACTGA 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595750703759440