Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 >seq3 Length=41204908 Score = 147 bits (162), Expect = 2e-30 Identities = 562/869 (65%), Gaps = 15/869 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 || || || | |||||| ||||| || ||||||||||| |||| ||||||||| |||| Sbjct 34261628 TGATAGTCCCCAACGCGCTTTTCAAAGAAGTTAGTTTTCCCCTGGAGAGATATAAGCTCC 34261569 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 || ||||||| ||||| | | | | || | | || || | | | || Sbjct 34261568 ATCCAATCAAAGGGATTCTGAACACCGTACACCTTCCCGCATCCAAGCGCACCCAGTAGC 34261509 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | |||||| ||||| || ||||| || | ||| ||||| | |||||| || | | ||| Sbjct 34261508 CGATCCGCGACAAACTCAATATACTGACTCATCAATTCCCCGTTCATCCCCACCA-ACGC 34261450 Query 16856 ACC-GGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 || ||||| || || || ||| || | |||||| |||||||||| | ||| Sbjct 34261449 ACAAGGAAGCGCGTCGCACACAAACTCCCT-CTCTATGTCAACCGCTTCGCGCACAATCT 34261391 Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 || |||||||||| | | | | || | ||| || || ||||| | Sbjct 34261390 CCTTCACGCGTTCCTCGGTGAGCTTCTTCCTGAGGAGAGAGTACAAGAGGCACGCGAAGT 34261331 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 |||| || | || || |||| ||| |||||||| || || || | ||||||||| Sbjct 34261330 CGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCA 34261271 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 || || ||||| | ||||||||||| | ||| || || ||||| || ||||| | Sbjct 34261270 AGCCACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAA 34261211 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153 || | || || |||| | || |||||| | | ||| || | ||||| | Sbjct 34261210 CGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGA---GTCGGTGGCATCGATCCAGCGCA 34261154 Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCT 17213 |||| | ||| || | | || || || || | ||| || | | | Sbjct 34261153 AGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGAT 34261094 Query 17214 CTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 ||||| || | ||| | || || || || | ||| || |||||||| |||||||| Sbjct 34261093 TCTTTTCG-GTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTCGGAGTGG 34261035 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 |||||||| ||||| ||||| || ||||| |||||| || || || || ||| | ||| Sbjct 34261034 ATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCA-CGAGCCTCGGCGGCTTGGATTTC 34260976 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||| || | || || |||||| |||||||||||| ||||| || || || Sbjct 34260975 CTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAAGAAGGC 34260916 Query 17392 CAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGCGCCAGTCCTTTAAA 17449 | || || | ||||| | ||| | ||||| || | ||||| | Sbjct 34260915 GAGGATGTGGGTGATGAAGTGGCGCTCGCCGTCGGTG--AGGGAGTCCCAGTGGCGGAGG 34260858 Query 17450 TCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATA 17509 |||| ||| | || || ||||||| |||||| ||| ||| | || || || ||||| Sbjct 34260857 TCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAGAAAGAAGCTTCGGCTTTCTTGTACATT 34260798 Query 17510 TTCCAAATATCATTGTATTGTATGGGGAA 17538 | ||| || | |||||| || ||||| Sbjct 34260797 TCCCAGATTTGGGGGTATTGGATTGGGAA 34260769 Score = 122 bits (134), Expect = 9e-23 Identities = 293/435 (67%), Gaps = 9/435 (2%) Strand=Plus/Plus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || ||||| |||||||| | |||||||| | | ||| |||||||| || || || Sbjct 26200336 CAGGCAAGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGT 26200395 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | || ||||| || |||||||| | ||| || || | | || || || || Sbjct 26200396 GAGTCCTGGCATGAGGCCCCGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAA 26200455 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| |||||||||||| | ||||| |||| | || |||||| | | | || || Sbjct 26200456 GAAGATACCCTCGACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGT- 26200514 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 ||| |||| | |||| | ||| || | | | ||| || || || ||||| Sbjct 26200515 -CGA-TCCAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGC 26200572 Query 17200 CTTAAATAATTTCTCTTTTTC-CTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTG 17257 | ||| | | ||||| || | ||| |||| || || |||| ||| |||||| Sbjct 26200573 GTGAAAGAGA--CGGGTTTTCTCTACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTG 26200630 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 ||||| |||||||| |||||||| || || ||||| || ||||||||| || || || Sbjct 26200631 TACATCTCGGAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCG 26200690 Query 17318 GCTATTTGAACTTCC-ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | | || || ||| | || || || | || || ||||| |||||||||||| Sbjct 26200691 GAGACCTGGACCTCCTTCATA-AAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGA 26200749 Query 17377 CGCGGCGAAAAACGC 17391 |||||||| || || Sbjct 26200750 GGCGGCGAAGAAGGC 26200764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517303809165000