Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 >seq3 Length=41204908 Score = 100 bits (110), Expect = 3e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || |||||||||||||| || || ||||| | | ||| ||||||||||| ||||| Sbjct 26200337 AGGCAAGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTG 26200396 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATG-ACCCCGAAAA 16317 | |||||||| || |||||||| | |||||| || | |||||| | || || || Sbjct 26200397 AGTCCTGGCATGAGGCCCCGTTTCTTGAGCCAGAAGAT-GGAGCAAAAGCTTCCGGAGAA 26200455 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| |||||||| || | ||||| |||| Sbjct 26200456 GAAGATACCCTCGACGCAGGCAAAGGCGA 26200484 Score = 89.7 bits (98), Expect = 5e-13 Identities = 297/452 (66%), Gaps = 9/452 (2%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || || ||||| |||| ||| ||||||||||| || || Sbjct 34261343 AGGCACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTG 34261284 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | || ||||| || || ||||| | ||| ||||||| |||| || || || || Sbjct 34261283 AGACCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCG-AGCAGAAGCTGCCGGAGAA 34261225 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 ||| || |||||||| | || || |||| | || || ||| | | || || | Sbjct 34261224 GAAGATTCCCTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCG-AAGGAG--TCGGTGGC 34261168 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | ||||| | |||||| ||| || | | ||| || || || | ||| Sbjct 34261167 ATCGATCCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGC 34261108 Query 16438 CTTAAACA-ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 |||| | |||||| || | || | || || || || | || | ||||| Sbjct 34261107 GCGGAACAGGTGATTCTTTTCGGTGGA-GTCTTTGATGTAGGTTTCCAAGAGGAGACTGT 34261049 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCTCC 16555 |||| || ||||| |||||||| ||||| ||||| || || ||| ||||| |||||||| Sbjct 34261048 ACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCA-CGAGCCTCG 34260990 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 || ||| | |||| || || | || ||||| || ||||| ||||| Sbjct 34260989 GCGGCTTGGATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCGTCGGAG 34260930 Query 16616 GCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || ||||| || || | ||||| | ||||| Sbjct 34260929 GCGGCAAAGAAGGCGAGGATGTGGGTGATGAA 34260898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511175473585000