Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=42234885 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| || || ||||| ||| ||| ||| || Sbjct 37712651 ATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATAACCTTGGAAGTGGAGAGTTCA 37712592 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || ||| ||| ||||| || ||| | ||| |||||| Sbjct 37712591 GATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCAG 37712532 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || ||||| || ||||| | || | || ||||| || Sbjct 37712531 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGACGGAAGGACCCTTGCGGATTATAAC 37712472 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||||||||||| ||||| ||| |||| || Sbjct 37712471 ATACAGAAGGAATCCACTCTGCACTTGGTTTT 37712440 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | || || ||||| || || |||||||| || ||| | | Sbjct 37706947 AATGCAAATTTTTGTAAAGACGTTGACTGGAAAGACCATTACTTTGGAGGTTGAAAGCTC 37706888 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | ||| ||| ||| || ||||| || | || ||| || Sbjct 37706887 TGATACCATTGATAATGTAAAGGCAAAGATTCAGGACAAAGAGGGGATTCCACCAGACCA 37706828 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||| ||||||||||| || || || ||||||||| ||| | || ||||| || Sbjct 37706827 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAA 37706768 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||||||||||||||||| ||| ||||||| Sbjct 37706767 CATCCAGAAGGAATCTACTCTGCACTTGGTGTT 37706735 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| || ||||| |||||| || ||| || Sbjct 37703212 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 37703153 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || ||| ||||| || ||| | ||| ||||| Sbjct 37703152 GATACCATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCCGATCAG 37703093 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || ||||| || |||||| | ||| | || ||||| ||| Sbjct 37703092 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 37703033 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || |||||||| |||||| | ||| |||| || Sbjct 37703032 ATCCAGAAGGAGTCTACTTTGCACTTGGTTTT 37703001 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| ||||| ||||| ||||| ||| ||| ||| | | Sbjct 37713107 ATGCAGATCTTTGTGAAAACTTTGACTGGCAAGACCATAACCCTTGAAGTAGAATCGTCT 37713048 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || || || ||||| ||| | || ||||| Sbjct 37713047 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAG 37712988 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| || || ||||| || ||||| || || ||| | ||| | |||||||||||| Sbjct 37712987 CAAAGGCTGATTTTTGCTGGTAAACAGCTTGAGGATGGGAGAACCCTTGCCGATTACAAT 37712928 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||| || || || ||| ||||| | || ||| | || || Sbjct 37712927 ATTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGGTTAAGGGGTGG 37712881 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| || || ||||| ||| || ||| || Sbjct 37707174 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATAACCTTAGAGGTGGAGAGTTCA 37707115 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || ||| ||||| || ||| | ||| ||| || Sbjct 37707114 GATACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATCCCCCCAGACCAG 37707055 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || ||||| || |||||| | ||| | || |||||||| Sbjct 37707054 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTACAAC 37706995 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||||| |||||||| || ||| |||| || Sbjct 37706994 ATCCAGAAAGAATCTACCCTGCACTTGGTTTT 37706963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428140889605625