Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq109 105 6e-18 seq5 105 6e-18 seq2 104 2e-17 >seq1 Length=42234885 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || ||||| | ||||| |||| |||||| || || || |||||||| || | Sbjct 37702528 TTCCACCACGAAGCCTCAACACCAAGTGCAGAGTGGATTCTTTCTGGATGTTATAATCTG 37702587 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | | || |||| ||| || || ||| | |||||||||||||||||| | Sbjct 37702588 CAAGGGTACGCCCATCTTCCAACTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCCGGTG 37702647 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| |||||| || || | | | | ||| ||| | || Sbjct 37702648 GGATGCCTTCCTTGTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCAA 37702707 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || ||||| || || ||||| || || ||||| || |||||| Sbjct 37702708 CCTCCAAAGTTATGGTTTTCCCAGTTAAAGTCTTCACAAAAATCTGCATT 37702757 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||||| || | |||||||||||||||||||| || || | Sbjct 6126211 TTCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAATCAG 6126270 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | | ||||| ||||||||||| ||| |||| || | ||||||||| | Sbjct 6126271 CAAGGGTACGACCATCCTCAAGCTGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTG 6126330 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||||| |||||| | | | ||||| | ||| Sbjct 6126331 GGATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCAATGGTATCTGAGCTCTCTA 6126390 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | || |||||||| ||||| | || || || || |||||||| Sbjct 6126391 CTTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTAACGAAGATTTGCAT 6126439 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| |||||||| ||||| |||| ||| | | || |||| ||||| || Sbjct 37706522 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCA 37706581 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| |||||||| || || | ||| |||||||| |||||| |||| Sbjct 37706582 GCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTC 37706641 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | |||||| | |||| |||| |||||||||||| || || | || Sbjct 37706642 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTC 37706701 Query 21159 TTGACAAATATTTGCATT 21176 || |||||||| |||||| Sbjct 37706702 TTCACAAATATCTGCATT 37706719 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || ||||| | ||||| |||| ||| || ||||| || |||||||| || | Sbjct 37706718 TTCCACCACGAAGCCTCAACACCAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCAG 37706777 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | |||||| | | || |||||||| || || ||| | ||||| || |||||||| | Sbjct 37706778 CAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTG 37706837 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| |||||| || || | | | |||||| | || Sbjct 37706838 GAATCCCCTCTTTGTCCTGAATCTTTGCCTTTACATTATCAATGGTATCAGAGCTTTCAA 37706897 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||||||||| || || ||||| || ||||| ||||||||| Sbjct 37706898 CCTCCAAAGTAATGGTCTTTCCAGTCAACGTCTTTACAAAAATTTGCATT 37706947 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | |||||| |||||||| ||||| || ||||| || || | | ||| Sbjct 37707419 AGCACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCC 37707478 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || || || || |||||| | ||||||||||||||||| || | || |||||||| Sbjct 37707479 TCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 37707538 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| |||||| | | | || || || || || | ||| ||||| Sbjct 37707539 TGAATCTTTGCTTTCACGTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTT 37707598 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || ||||| || ||||| ||||| Sbjct 37707599 TTGCCGGTCAAAGTTTTCACGAATATCTGCAT 37707630 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 ||||||| || ||||| | |||| |||| || || || || || ||||| || |||| Sbjct 37706946 TTCCCCCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCG 37707005 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | |||||| | || || |||||||| || ||| | ||||| ||||||||||| || Sbjct 37707006 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 37707065 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || ||||| || ||||| |||||| | | | ||||| |||| Sbjct 37707066 GGATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCA 37707125 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || || || |||||||| |||||||| Sbjct 37707126 CCTCTAAGGTTATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 37707174 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | |||||| |||||||||||||| || || || |||||| ||||| Sbjct 37703229 AGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCC 37703288 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || || ||||| || || |||| || |||||||| ||| || | ||||| ||||| Sbjct 37703289 TCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCC 37703348 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | ||||| || ||| || | || || || Sbjct 37703349 TGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCACCTCGAGTGTGATAGTT 37703408 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| || ||||| || || |||||||| Sbjct 37703409 TTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 20960 CCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGC 21019 || |||||||| || | ||||||||||| ||||| || || || || |||||| | Sbjct 37712892 CCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTCCC 37712951 Query 21020 GTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTT 21079 ||||| |||||||| || ||| |||| || || ||||| ||| || | || || || Sbjct 37712952 ATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGGGATACCCTCTTT 37713011 Query 21080 GTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAAT 21139 ||| |||||| || || | | | || ||| | || ||| | ||| || Sbjct 37713012 GTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTTAT 37713071 Query 21140 GGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||| || || ||||| ||||| || ||||| Sbjct 37713072 GGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| | ||| || || || ||||||||||| || |||| |||| || | || || || || Sbjct 6126008 ATGGAGAGTTGATTCTTTCTGAATGTTATAATCTGCCAAGGTTCGGCCATCTTCTAGTTG 6126067 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || || ||| | || || ||||||||||| || | || |||||||| ||||| Sbjct 6126068 CTTTCCGGCAAATATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATCTT 6126127 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || || | | | | ||| ||| | || || | ||| |||||||| ||||| Sbjct 6126128 GGCCTTGACATTGTCTATAGTGTCAGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCGGT 6126187 Query 21152 TAACGTTTTGACAAATATTTGCATT 21176 | || |||||||| ||||||||| Sbjct 6126188 GAGGGTCTTGACAAAGATTTGCATT 6126212 >seq109 Length=622178 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| || | ||||| ||||| || || Sbjct 289499 GTTGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 289558 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| | ||||||||||| ||| | ||| |||||||| ||||| ||| Sbjct 289559 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTC 289618 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||||| | |||| || | ||| || ||||| ||||| | || Sbjct 289619 ACGTTGTCGATGGTATCTGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCGGTAAGGGTC 289678 Query 21159 TTGACAAATATTTGCATT 21176 ||||| ||||| |||||| Sbjct 289679 TTGACGAATATCTGCATT 289696 >seq5 Length=30687117 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||||||||||||||| ||||| ||||| || Sbjct 9179534 CCACCGCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCG 9179475 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | |||||||||| || Sbjct 9179474 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9179415 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| || || | ||| || ||| | |||| Sbjct 9179414 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAAGACTCCACC 9179355 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||| || || | ||||| || ||||| |||||| Sbjct 9179354 TCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCATT 9179307 >seq2 Length=35625406 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| || ||||| || | |||||||||||||| || Sbjct 31176538 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGTTTTCCG 31176597 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | |||||||||||| ||| | || |||||||| |||||| ||| Sbjct 31176598 GCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTC 31176657 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | ||| || | ||| |||||||| ||||| | || Sbjct 31176658 ACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTC 31176717 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 31176718 TTGACAAAGATCTGCAT 31176734 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| || ||||| || | ||||| |||||||| || Sbjct 31176994 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCA 31177053 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | |||||||||||| ||| | || |||||||| |||||| || Sbjct 31177054 GCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTT 31177113 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | ||| |||||||| ||||| | || Sbjct 31177114 ACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTC 31177173 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 31177174 TTGACAAAGATCTGCAT 31177190 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| |||||||| || || || ||||| | |||||||||||||| || Sbjct 31176310 GTGGATTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCG 31176369 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | |||||||||||| ||| | || |||||||| |||||| || Sbjct 31176370 GCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTG 31176429 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | ||| || | ||| |||||||||||||| | || Sbjct 31176430 ACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 31176489 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 31176490 TTCACAAAGATCTGCAT 31176506 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| || ||||| || | ||||| |||||||| || Sbjct 31176766 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCG 31176825 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | |||||||||||| ||| | || |||||||| |||||| || Sbjct 31176826 GCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTG 31176885 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | ||| || | ||| |||||||| ||||| | || Sbjct 31176886 ACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTC 31176945 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 31176946 TTGACAAAGATCTGCAT 31176962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422066857635500