Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=42234885 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25028 TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGA 25087 |||| | |||||||| ||| | ||||| ||||| || ||||| || || ||| ||| Sbjct 37703447 TGTACAGATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACACTCGAGGTGGA 37703388 Query 25088 ACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGT 25147 | || | || || | | || | ||| || || || ||||||||| | || Sbjct 37703387 ATCCTCCGATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCC 37703328 Query 25148 AGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGA 25207 ||||| || || || || || || || |||||| | || || | ||| | || || Sbjct 37703327 GGATCAGCAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGA 37703268 Query 25208 TTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||| |||||||||||||| ||||| ||| |||| Sbjct 37703267 TTACAACATTCAAAAGGAATCCACTCTCCACTTGGT 37703232 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| || ||||| |||||| || ||| || Sbjct 37703212 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 37703153 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| || ||| ||||| || ||| | ||| ||||| Sbjct 37703152 GATACCATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCCGATCAG 37703093 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || ||||||||||| || ||||| | |||||| | ||| | || ||||| ||| Sbjct 37703092 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 37703033 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || || ||||| |||||| | ||| |||| || Sbjct 37703032 ATCCAGAAGGAGTCTACTTTGCACTTGGTTTT 37703001 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| || || ||||| ||| ||| ||| || Sbjct 37712651 ATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATAACCTTGGAAGTGGAGAGTTCA 37712592 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || | || ||| ||| ||||| || ||| | ||| |||||| Sbjct 37712591 GATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCAG 37712532 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || ||||||||||| || ||||| | ||||| | || | || ||||| || Sbjct 37712531 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGACGGAAGGACCCTTGCGGATTATAAC 37712472 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || || |||||||| ||||| ||| |||| || Sbjct 37712471 ATACAGAAGGAATCCACTCTGCACTTGGTTTT 37712440 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | ||||| ||||| ||||| ||||| ||| ||| ||| | | Sbjct 37713107 ATGCAGATCTTTGTGAAAACTTTGACTGGCAAGACCATAACCCTTGAAGTAGAATCGTCT 37713048 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || || || ||||| ||| | || ||||| Sbjct 37713047 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAG 37712988 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| || || ||||| || ||||| | || ||| | ||| | |||||||||||| Sbjct 37712987 CAAAGGCTGATTTTTGCTGGTAAACAGCTTGAGGATGGGAGAACCCTTGCCGATTACAAT 37712928 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||| || || || ||| ||||| | || ||| | || || Sbjct 37712927 ATTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGGTTAAGGGGTGG 37712881 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || || ||||| || || |||||||| || ||| | | Sbjct 37706947 AATGCAAATTTTTGTAAAGACGTTGACTGGAAAGACCATTACTTTGGAGGTTGAAAGCTC 37706888 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||| ||| || ||||| || | || ||| || Sbjct 37706887 TGATACCATTGATAATGTAAAGGCAAAGATTCAGGACAAAGAGGGGATTCCACCAGACCA 37706828 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||||| ||||||||||| || || || |||||||| ||| | || ||||| || Sbjct 37706827 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAA 37706768 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || || |||||||||||||| ||| ||||||| Sbjct 37706767 CATCCAGAAGGAATCTACTCTGCACTTGGTGTT 37706735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410609678848250