Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 seq6 105 4e-18 seq3 105 4e-18 seq2 98.7 6e-16 seq5 95.1 8e-15 >seq1 Length=42234885 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||||| ||||| ||| | ||| ||||||||| ||||| || || | Sbjct 37702529 TCCACCACGAAGCCTCAACACCAAGTGCAGAGTGGATTCTTTCTGGATGTTATAATCTGC 37702588 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || ||||||||||| || || || || || | ||||||||| || Sbjct 37702589 AAGGGTACGCCCATCTTCCAACTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCCGGTGG 37702648 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| |||||| ||||| || | | || | || | ||| || Sbjct 37702649 GATGCCTTCCTTGTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCAAC 37702708 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || |||||||| || || | ||| |||||||| |||||||| Sbjct 37702709 CTCCAAAGTTATGGTTTTCCCAGTTAAAGTCTTCACAAAAATCTGCAT 37702756 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| ||||||||||| | || ||| | || ||||| ||||| || || || Sbjct 37712232 TTCTTTCTGAATGTTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCAGCAAA 37712291 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| |||| |||||| || || | || ||||||||| |||||| ||| | || Sbjct 37712292 AATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTCACATT 37712351 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | ||| || |||| || |||||||| || || ||||| ||||| Sbjct 37712352 ATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCAC 37712411 Query 34378 AAAGATCTGCAT 34389 ||| |||||||| Sbjct 37712412 AAAAATCTGCAT 37712423 Score = 86.0 bits (94), Expect = 4e-12 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || || ||||| | || ||| ||||| ||||||||||| Sbjct 37706488 GAAGCCACCACGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTC 37706547 Query 34219 GGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGA 34277 | | || || || | || ||||| || || || || ||||| |||| |||||| || Sbjct 37706548 TGCCAAGGTG-CGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTG 37706606 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGAT 34336 || | || ||||||||| ||| |||||||| | || | || | ||| | Sbjct 37706607 GTGGAATGCCCTCCTTGTCTTGAATC-TTTGCTTTCACATTATCAATTGTATCAGAGCTC 37706665 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || |||| || ||||| || || || ||||| |||||||| |||||||| Sbjct 37706666 TCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT 37706718 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| ||| || || |||||||| || | || || | || Sbjct 37707419 AGCACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCC 37707478 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || || || || || | ||||||||| || | | ||||||||| Sbjct 37707479 TCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 37707538 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||||| | | | || | |||| ||||| || || | |||||||| Sbjct 37707539 TGAATCTTT-GCTTTCACGTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGT 37707597 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||||||| | ||||||||| || ||||||||| Sbjct 37707598 TTTGCCGGTCAAAGTTTTCACGAATATCTGCATC 37707631 >seq6 Length=19356003 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| |||||||| ||||||||||| | Sbjct 11947017 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGCG 11947076 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||| |||||||| ||||| |||||||| || || Sbjct 11947077 AGAGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATGAGACGCTGCTGATCCGGTGGG 11947136 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 11947137 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACC 11947196 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | |||||||| || || || || |||||||| || ||||||||| || Sbjct 11947197 TCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCATCCCT 11947247 >seq3 Length=41204908 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| |||||||| ||||||||||||| Sbjct 288800 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCG 288741 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| |||||||| ||||| |||||||| || || Sbjct 288740 AGGGTGCGACCGTCCTCAAGCTGCTTTCCTGCGAAGATGAGACGCTGCTGATCTGGTGGG 288681 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | || | || | || || || Sbjct 288680 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATGGTGTCAGAAGACTCCACC 288621 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | ||||| || || || || || |||||||| || |||||||||||| Sbjct 288620 TCAAGGGTGATTGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCATCGCT 288570 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| |||||||| ||||||||||||| Sbjct 291388 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCG 291329 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||| || |||||||| ||||| || ||||| || || Sbjct 291328 AGGGTGCGACCGTCCTCGAGCTGTTTTCCTGCGAAGATGAGACGTTGCTGATCTGGTGGG 291269 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 291268 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACC 291209 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 || | ||||| || || || || || |||||||| || |||||||| || Sbjct 291208 TCAAGGGTGATTGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCATTGC 291159 >seq2 Length=35625406 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 31176508 CCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 31176567 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| || || ||||| || | || ||||||||| ||| Sbjct 31176568 AGGGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 31176627 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | || | || || Sbjct 31176628 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACC 31176687 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||||||||| || |||||||||||||| Sbjct 31176688 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 31176734 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 31176964 CCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 31177023 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||| || || ||||| || | || ||||||||| ||| Sbjct 31177024 AGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGA 31177083 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||||| | | | || | || | || || Sbjct 31177084 ATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACC 31177143 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||||||||| || |||||||||||||| Sbjct 31177144 TCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 31177190 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 31176736 CCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 31176795 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||| || || ||||| || | || ||||||||| ||| Sbjct 31176796 AGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 31176855 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | || | || || Sbjct 31176856 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACC 31176915 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || |||||||| || || |||||||||||||| Sbjct 31176916 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 31176962 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 31177192 CCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 31177251 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | |||||| || ||||| ||||| || |||||||| ||| Sbjct 31177252 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGA 31177311 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | | | | || | ||||| ||||| Sbjct 31177312 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTCGACC 31177371 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||| || || || || ||||||||||| Sbjct 31177372 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCAT 31177418 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 31177420 CCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 31177479 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||| || || ||||| ||||| || |||||||| ||| Sbjct 31177480 AGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGA 31177539 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||| | | | | || | ||||| ||||| Sbjct 31177540 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTCGACC 31177599 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||| || || || || |||||||||||| Sbjct 31177600 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCATC 31177647 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | ||| || ||||| | || ||| ||||| |||||||| || Sbjct 31176277 AAGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCA 31176336 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || | | || |||| ||| || || ||||| || | || ||||||||| | Sbjct 31176337 GCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGG 31176396 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | ||||||||| ||||| ||| | | | | || | || | || Sbjct 31176397 GGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCA 31176456 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| |||||||||||||| ||||||||||||||||| Sbjct 31176457 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 31176506 >seq5 Length=30687117 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || || || ||||||||||||| Sbjct 9179534 CCACCGCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCG 9179475 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| ||||| ||||||||||| || Sbjct 9179474 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9179415 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | || | || | || || || Sbjct 9179414 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAAGACTCCACC 9179355 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 || | |||||||| || || || || |||||||| || |||||||| || Sbjct 9179354 TCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCATTGC 9179305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322924838180000