Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq8 105 5e-18 seq4 100 2e-16 >seq1 Length=42234885 Score = 114 bits (126), Expect = 1e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || |||||||| || ||| ||||||||||||||||||||||| ||||| || || ||| Sbjct 29904406 CAGTTTTACGTAGCAAATGGGGAATTGTCGTGTCAAATGTATCAGCGATCTGCGGACATG 29904347 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || ||||| || || || ||||||||| |||||| || || || | |||||||| ||| Sbjct 29904346 GGCCTGGGGGTGCCATTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCAT 29904287 Query 20551 GTT 20553 ||| Sbjct 29904286 GTT 29904284 >seq8 Length=30791815 Score = 105 bits (116), Expect = 5e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || |||||||| || || ||||| ||||||||||||||||| ||||| || || ||| Sbjct 27451222 CAGTTTTACGTAGCAAAGGGGGAATTATCGTGTCAAATGTATCAGCGATCTGCGGACATG 27451163 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || ||||| || || || ||||||||| |||||| || || || | |||||||| ||| Sbjct 27451162 GGCCTGGGGGTCCCATTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCAT 27451103 Query 20551 GTT 20553 ||| Sbjct 27451102 GTT 27451100 >seq4 Length=34671004 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || || || || || |||||||||||||| ||||| ||||| ||| Sbjct 34097114 CAGTTTTATGTAGCACATGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACATG 34097173 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || ||||| ||||| || ||||||||| |||||| || || || | |||||||| ||| Sbjct 34097174 GGCCTGGGCGTTCCATTTAATATTGCATCTTATGCCCTACTGACATGCATGATTGCTCAT 34097233 Query 20551 GTT 20553 ||| Sbjct 34097234 GTT 34097236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399002168569375