Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=42234885 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | |||||| || |||||||| |||||||||||||| ||| Sbjct 37712197 CCACCACGAAGGCGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCC 37712256 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||||||||| || || ||| | ||||| || || ||||| || Sbjct 37712257 AAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGG 37712316 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | | ||| || | ||| || ||| | || Sbjct 37712317 ATGCCCTCCTTGTCCTGAATCTTTGTCTTCACATTATCAATTGTATCAGAGCTTTCCACC 37712376 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||| ||| |||| || |||| || || |||||||| ||||| Sbjct 37712377 TCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAAAATCTGCAT 37712423 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| || | ||| || || ||||| ||||| |||||||| || || Sbjct 37707404 CCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGCA 37707463 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||| || | ||| || |||||| |||||||||| || || || || Sbjct 37707464 AGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 37707523 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || ||| | |||||| || | ||| ||||| || || Sbjct 37707524 ATACCCTCCTTGTCTTGAATCT-TTGCTTTCACGTTATCAATGGTGTCGGAGGATTCAAC 37707582 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| ||||||||||||| ||||| || || || ||||| Sbjct 37707583 CTCAAGGGTGATGGTTTTGCCGGTCAAAGTTTTCACGAATATCTGCAT 37707630 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || ||||| || |||||||||||||| ||| Sbjct 37706492 CCACCACGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 37706551 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||||||||| || ||| | ||||| || || ||||| || Sbjct 37706552 AAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 37706611 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || ||| | |||| || || | ||| || ||| | ||| Sbjct 37706612 ATGCCCTCCTTGTCTTGAATCT-TTGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 37706670 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | || || |||| || || ||||| || |||||| Sbjct 37706671 CTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATT 37706719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379171205844375