Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 197 1e-45 seq1 105 6e-18 >seq3 Length=41204908 Score = 197 bits (218), Expect = 1e-45 Identities = 495/746 (66%), Gaps = 7/746 (1%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || |||| || | || ||| | |||||||| || || ||||| || || Sbjct 34260765 CATGTTCCCAATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCTTCTTT 34260824 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||||| |||||| || ||||| || | || || || | ||||| ||||||| || Sbjct 34260825 CTGGACCGCCGAAGAGGTTGACCTCTCCCAAGACCTCCGCCACTGGGACTCCCTCACCGA 34260884 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 ||| | | || || | ||| | | || || || ||||| ||||| || || || Sbjct 34260885 CGGCGAGCGCCACTTCATCACCCACATCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGT 34260944 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784 | ||| || | | | | || | ||| | |||| | ||||| | ||||| Sbjct 34260945 TCTCGAAAACCTCGCTGCCCGCTTCATGAAGGAAATCCAAGCCGCCGAGGCTCG-TGCTT 34261003 Query 57785 T-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCG 57843 | ||||| || || | ||||| || ||| | || || || ||||| || ||| | | Sbjct 34261004 TCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCTTGG 34261063 Query 57844 ATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGC 57903 | || ||| | || ||| | ||| || | |||||| ||| |||| || || | Sbjct 34261064 AAACCTACATCAAAGACTCCACCGAAAAGAATCACCTGTTCCGCGCCGTCGATACCATCC 34261123 Query 57904 CCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGT 57963 || ||||||||||||| | ||| | | ||||| | ||||| | | | | Sbjct 34261124 CCTGTGTCGCCAAGAAGGCCCAATGGGCCTTGCGCTGGATCGA---TGCCACCGACTCCT 34261180 Query 57964 TCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-T 58022 |||||||| | || |||| |||||| ||| || || || ||||| || |||||||| | Sbjct 34261181 TCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGCTTCT 34261240 Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 || | ||||||||| | ||||| || ||| |||||||||| || || || |||||| Sbjct 34261241 GC-TCGATATTTTGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAA 34261299 Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142 | || ||||| || || || || || || || |||||||| ||||||||| | | Sbjct 34261300 CTCATCTCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGCCTCTTGTACTCTCTCCTC 34261359 Query 58143 GTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA 58202 || || | || ||| ||| | ||| ||| | ||| ||||| | || || Sbjct 34261360 AGGAAGAAGCTCACCGAGGAACGCGTGAAGGAGATTGTGCGCGAAGCGGTTGACATAGAG 34261419 Query 58203 AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG 58262 | |||||||| ||| || || || || || | || |||||| || |||||| Sbjct 34261420 AGGGAGTTTGTGTGCGACGCGCTTCCTTGTGCGTTGGTGGGGATGAACGGGGAATTGATG 34261479 Query 58263 TCAAAGTACATTGAGTTTGTTGCCGA 58288 |||| ||||||||||| || || Sbjct 34261480 AGTCAGTATATTGAGTTTGTCGCGGA 34261505 Score = 190 bits (210), Expect = 2e-43 Identities = 560/855 (65%), Gaps = 15/855 (2%) Strand=Plus/Minus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || |||| || | || ||| | |||||||| || |||||||| ||||| Sbjct 26200915 CATGTTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTT 26200856 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||| | || || || ||||| || |||| | || | ||| | | || | || Sbjct 26200855 CTGGACGGCGGAGGAGGTGGACCTCTCGCAGGACATCAGTCACTGGAACACTCTTACCGA 26200796 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 ||| | |||| | | || || | || || |||||||| ||||| || || || Sbjct 26200795 CGGCGAGCGCCATTTCGTCACCCATGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGT 26200736 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784 || || | | || | ||| | || || || || | ||||| | ||| Sbjct 26200735 ACTAGAAAACCTTGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCTCGCGCCTT 26200676 Query 57785 TTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844 |||||| || || | || || || ||| | || || || ||||| || ||| |||| Sbjct 26200675 TTACGGCTTCCAGATCGCTATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGA 26200616 Query 57845 TACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC 57904 || ||| | || ||| || |||||| | || || |||| || || || || || Sbjct 26200615 AACCTACATAAAAGACTCCGTAGAGAAAACCCGTCTCTTTCACGCCATTGACACCATTCC 26200556 Query 57905 C-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGT 57963 | ||| || |||||||||| | ||| | || ||||| | | || | || | Sbjct 26200555 CTGCG-TCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGACTCCTCCGAGTCC---T 26200500 Query 57964 TCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTG 58023 |||||||| | || |||| || ||| |||||| ||||| ||||| || || |||||| Sbjct 26200499 TCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGCTTTT 26200440 Query 58024 CGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGT 58083 | || || ||| | |||||||| ||||| ||||| || || || || |||||| Sbjct 26200439 GCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAACGAAC 26200380 Query 58084 TGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG 58143 | || || |||||||||||||||||| || || || ||||| | |||||| | || Sbjct 26200379 TCATCTCCCGCGACGAGGGTCTCCATTGCGACTTCGCTTGCCTGCTCTACTCT-ATTATG 26200321 Query 58144 TCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA 58202 | || | | || ||| ||| | ||| ||| | ||| || || | ||||| Sbjct 26200320 CGGACCAAGCTCCCCGAGGAGCGCGTGAGGGAGATTGTGCGCGATGCTGTGGACATCGAG 26200261 Query 58203 AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG 58262 | ||||| ||| ||| || || || || || | || |||||| | |||||| Sbjct 26200260 AGGGAGTTCGTCTGCGACGCGCTTCCTTGTGCGTTGGTGGGGATGAACGGGGCCTTGATG 26200201 Query 58263 TCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA- 58321 ||||||||||||||||||| || || ||||||| |||| | ||| | Sbjct 26200200 AGTCAGTACATTGAGTTTGTTGCTGATAG---GTTGCTCGGTGCCCTTGG-GTGCGGGAA 26200145 Query 58322 ---TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGAC 58378 ||||| | || || || |||| ||| | ||||| ||||| |||| ||||| Sbjct 26200144 GGTGTACAATGTACAGAACCCATTCGATTGGATGGAGCTGATTTCGCTGCAGGGGAAGAC 26200085 Query 58379 AAACTTTTTCGAAAA 58393 ||||| ||||| || Sbjct 26200084 CAACTTCTTCGAGAA 26200070 >seq1 Length=42234885 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || ||||| || || | || || || || Sbjct 6125983 ATGCAGATTTTCGTCAAGACCCTTACTGGAAAAACAATTACTTTGGAGGTGGAGAGTTCA 6125924 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| ||||||||| ||| | || || |||||| Sbjct 6125923 GACACGATTGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATTCCTCCAGACCAG 6125864 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | | || || ||||| || ||| | || || | | | ||| || |||||||| Sbjct 6125863 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGA-TGGACGTACTCTGGCTGATTATAA 6125805 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || ||||||||||| |||||| | |||||||| |||| Sbjct 6125804 CATTCAGAAGGAGTCCACTCTTCATCTTGTACTTCGTCTGAGGGGAGGTA 6125755 Score = 102 bits (112), Expect = 7e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || |||||||||||||| ||||| || ||| | || || ||| || Sbjct 37712424 CATGCAGATTTTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAAAGCTC 37712365 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || | || || ||| || || ||||||||| ||| | || || || | Sbjct 37712364 TGATACAATTGATAATGTGAAGACAAAG-ATTCAGGACAAGGAGGGCATCCCACCAGATC 37712306 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | || || || ||||| || || |||||||| | || || || || | Sbjct 37712305 AGCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACA 37712246 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| |||||||| || ||||| || || ||| Sbjct 37712245 ACATTCAGAAAGAATCCACCCTTCACCTTGTCCTT 37712211 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||| |||| || ||||| ||||| |||| || ||| | ||| Sbjct 37703440 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACACTCGAGGTGGAATCCTCC 37703381 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | || |||||| ||||| | || || || ||| Sbjct 37703380 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 37703321 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| ||||| | || ||| | || | ||||| ||| Sbjct 37703320 CAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 37703261 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| ||||| ||||| || |||| ||| | ||||||| || Sbjct 37703260 ATTCAAAAGGAATCCACTCTCCACTTGGTTCTTCGTTTGAGGGGGGG 37703214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| | || || ||||| || || | || |||||| || Sbjct 37702756 ATGCAGATTTTTGTGAAGACTTTAACTGGGAAAACCATAACTTTGGAGGTTGAAAGCTCT 37702697 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || || || ||| | ||||||||||||| | || || ||||| Sbjct 37702696 GACACTATTGACAATGTAAAGGCAAAGATTCA-GGACAAGGAAGGCATCCCACCGGACCA 37702638 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || ||||||||||| || | |||||||| Sbjct 37702637 GCAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGGCGTACCCTTGCAGATTATAA 37702578 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || |||||||| ||||| || |||| Sbjct 37702577 CATCCAGAAAGAATCCACTCTGCACTTGGT 37702548 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| | ||||| || || ||||| | || |||||| || Sbjct 6125755 ATGCAGATCTTTGTGAAGACTTTAACAGGGAAGACTATCACTTTGGAGGTTGAAAGCTCA 6125696 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | ||| |||||||||||| | || || || ||| Sbjct 6125695 GATACAATTGATAACGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCACCAGATCAG 6125636 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || ||||| || | |||| | ||||| ||| Sbjct 6125635 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGGAGGACTCTTGCTGATTACAAC 6125576 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||||| ||||| || || ||||| |||||| Sbjct 6125575 ATTCAGAAAGAGTCCACCCTTCACCTGGTA 6125546 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || || || || |||||| | || || ||| || Sbjct 6126211 ATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTCGAAAGCTCT 6126152 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || |||||||| || | || || |||||| Sbjct 6126151 GACACTATAGACAATGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAG 6126092 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || ||||| || || || || | ||||| || || ||||||||| Sbjct 6126091 CAGAGGCTCATATTTGCCGGAAAGCAACTAGAAGATGGCCGAACCTTGGCAGATTATAAC 6126032 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| |||||||| ||||| ||||| || Sbjct 6126031 ATTCAGAAAGAATCAACTCTCCATCTTGT 6126003 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||||||||| || ||||| || ||| | || |||||| || Sbjct 37702985 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACCATTACCTTGGAGGTTGAAAGTTC 37702926 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || | ||| |||||| || || | || || || || Sbjct 37702925 TGATACCATTGATAATGTAAAGGCTAAGATACAGGACAAAGAGGGGATTCCACCAGATCA 37702866 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || ||||| || ||| | ||||| || | |||||||| Sbjct 37702865 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTAGAAGATGGGCGTACCCTTGCTGATTATAA 37702806 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || ||||| ||||||||| |||| || || || Sbjct 37702805 CATCCAGAAGGAATCCACTCTTCATTTGGTGCTAAGGCT 37702767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445558143510000