Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq1 98.7 1e-15 >seq3 Length=41204908 Score = 131 bits (144), Expect = 2e-25 Identities = 382/581 (66%), Gaps = 12/581 (2%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| ||||| || ||||||||||| | || | ||||||||| || |||||| Sbjct 26200340 CAAGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGT 26200399 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ATCCAGAAAAGAA 36276 || ||||| ||||| || || || ||||| || ||||| ||||| | ||| || ||||| Sbjct 26200400 CCTGGCATGAGGCCCCGTTTCTTGAGCCAGAAGATGGA-GCAAAAGCTTCCGGAGAAGAA 26200458 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCACTGTCATG 36333 || || || || |||||||| | || | ||| | | || ||| ||| Sbjct 26200459 GATACCCTCGACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGTC--- 26200515 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | ||||| | ||||||||| | || || || || || || || || | Sbjct 26200516 GATCCAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTG 26200575 Query 36394 AAAGAGATAGtttttttCATTAC--TATCTTTAACATATGTATCAATCAAAAGACTATAC 36451 ||||||| | |||| || ||| ||||| | || || || | | || || ||| Sbjct 26200576 AAAGAGACGGGTTTTCTC--TACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTAC 26200633 Query 36452 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 36511 || || || |||||||| || || || || || || ||||| || | |||||||| Sbjct 26200634 ATCTCGGAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCGGAG 26200693 Query 36512 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 36571 | ||| || || | ||| || | || | ||||| || || ||||| ||| Sbjct 26200694 ACCTGGACCTCCTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGAGGCG 26200753 Query 36572 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAA 36631 || || || || | ||||| | | |||| ||| || || | ||||| Sbjct 26200754 GCGAAGAAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGAGTGTTCCAG 26200813 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 | | |||| || | || | ||||| || ||| | ||||| || || || ||||| || Sbjct 26200814 TGACTGATGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTC 26200873 Query 36692 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 36732 || ||||| | |||||| | | ||||| || || || || Sbjct 26200874 TTGTACATTTCCCAGATTTGGGGGTATTGGATAGGGAACAT 26200914 Score = 116 bits (128), Expect = 5e-21 Identities = 239/353 (68%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| |||||||| || || || |||| || | ||||||||| || ||||| Sbjct 34261340 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGA 34261281 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGAAAAGAA 36276 |||||||| | ||||||||| || ||||||||||| || ||| | | | || || ||||| Sbjct 34261280 CCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCGA-GCAGAAGCTGCCGGAGAAGAA 34261222 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTAT 36336 ||||| || || || ||||| | || | ||| | | | | || ||| || Sbjct 34261221 GATTCCCTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGGTGGCATCGAT 34261162 Query 36337 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 36396 ||| ||||| | ||||||||| ||||| || || || || | || || Sbjct 34261161 CCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAA 34261102 Query 36397 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 36456 || | || ||||| | ||||| | || || || | | ||||| ||||| || Sbjct 34261101 CAGGTGATTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTC 34261042 Query 36457 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 || || ||||| || ||||| || || || ||||||||| | |||||||| Sbjct 34261041 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGAGCCTCGG 34260989 >seq1 Length=42234885 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || |||| ||| || ||||| | ||| | ||| || | ||| | || | || |||||| Sbjct 1930113 CCTTTTGCCTCCCCCTTGATCCACGTAACGAGCAGTATCATTGAACACACGCAGCATTGG 1930054 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 || ||||||||| ||||| ||||| || || ||| || || || | ||||||||||| Sbjct 1930053 AACAATACCATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATT 1929994 Query 66326 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385 || || | ||| ||||| || || ||| || | || || || || || Sbjct 1929993 GTGAACAGAAACACCAATTCCACCGGCTGATTTGCTAATGATAGCACACTCCTTCAAAGT 1929934 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATG 66419 ||||| || ||||||||||||||||| ||||| Sbjct 1929933 GTCATATATTCCCTCTATACTATCATCTTTCATG 1929900 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013 |||||||||||| | || |||| | || || || || |||||| || |||| || Sbjct 1930579 TTCTCTTTCGTACTGAGTGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCCAAACC 1930520 Query 66014 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 66073 ||| |||||| || || | ||| ||||| | || | || |||| || |||||| Sbjct 1930519 TGGAGATTCATTGGGGCAAAACAAAGACCATTGCCCATTGCTCTGAACTCTTTCCATAAA 1930460 Query 66074 GAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109 ||||||||| | ||||||||| ||| |||||||| Sbjct 1930459 GAGATCAGGCACCCAAAGAGCATAAAACAAATCTCT 1930424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657865309895000