Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 176 6e-39 seq1 96.9 5e-15 seq25 86.0 9e-12 >seq3 Length=41204908 Score = 176 bits (194), Expect = 6e-39 Identities = 392/581 (67%), Gaps = 12/581 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||||| || ||||||||||| | || ||||||||||| || |||||| Sbjct 26200340 CAAGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGT 26200399 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACCCAGAAAAGAA 50078 || ||||| ||||| || || || ||||| || ||||| ||||| | || || ||||| Sbjct 26200400 CCTGGCATGAGGCCCCGTTTCTTGAGCCAGAAGATGGA-GCAAAAGCTTCCGGAGAAGAA 26200458 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACT-GGCGCTGTCATG 50135 ||| || || || ||||||||| || || | ||| | | ||| || | ||| Sbjct 26200459 GATACCCTCGACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGTC--- 26200515 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| | ||||||||| | || || || || || || ||||| | Sbjct 26200516 GATCCAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTG 26200575 Query 50196 AAAGAGATAGtttttttCATTAC--TATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 ||||||| | |||| || ||| ||||| | || || |||| | || || ||| Sbjct 26200576 AAAGAGACGGGTTTTCTC--TACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTAC 26200633 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 || || || |||||||| || || || ||||| || ||||| || | |||||||| Sbjct 26200634 ATCTCGGAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCGGAG 26200693 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 | ||| || || | ||| || | || | ||||| || || ||||| ||| Sbjct 26200694 ACCTGGACCTCCTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGAGGCG 26200753 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAA 50433 || || || || | ||||| | | ||||| ||| | || || | ||||| Sbjct 26200754 GCGAAGAAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGAGTGTTCCAG 26200813 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 | | |||| || | || | || || || ||| | ||||| || || || ||||| || Sbjct 26200814 TGACTGATGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTC 26200873 Query 50494 TTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 || ||||| | |||||| | | |||||||| ||||| || Sbjct 26200874 TTGTACATTTCCCAGATTTGGGGGTATTGGATAGGGAACAT 26200914 Score = 143 bits (158), Expect = 4e-29 Identities = 379/576 (66%), Gaps = 2/576 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| |||||||| || || || |||| || ||||||||||| || ||||| Sbjct 34261340 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGA 34261281 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAA 50078 |||||||| | ||||||||| || ||||||||||| || ||| | | || || ||||| Sbjct 34261280 CCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCGA-GCAGAAGCTGCCGGAGAAGAA 34261222 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTAT 50138 |||||| || || ||| ||||| || || | ||| | | | || || ||| || Sbjct 34261221 GATTCCCTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGGTGGCATCGAT 34261162 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| ||||| | ||||||||| ||||| || || || || | ||| || Sbjct 34261161 CCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAA 34261102 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 || | || ||||| | ||||| | || || || | | ||||| ||||| || Sbjct 34261101 CAGGTGATTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTC 34261042 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 50318 || || ||||| || ||||| ||||| || ||||||||| | |||||||| || Sbjct 34261041 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGAGCCTCGGCGGCTTG 34260982 Query 50319 CACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 50378 | ||| | || || |||| | ||||| || || ||||| ||| ||||| Sbjct 34260981 GATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAA 34260922 Query 50379 AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 || || | | || | || || || ||| | || || | ||| | Sbjct 34260921 GAAGGCGAGGATGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCG 34260862 Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 || |||| || | || || ||||| | ||||| || || || || || || || || Sbjct 34260861 GAGGTCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAGAAAGAAGCTTCGGCTTTCTTGTA 34260802 Query 50499 CATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 ||| | |||||| | | |||||||||||||| || Sbjct 34260801 CATTTCCCAGATTTGGGGGTATTGGATTGGGAACAT 34260766 >seq1 Length=42234885 Score = 96.9 bits (106), Expect = 5e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 |||| ||| || ||||| | ||| | ||| || | ||| | || | || |||||||| Sbjct 1930110 TTTGCCTCCCCCTTGATCCACGTAACGAGCAGTATCATTGAACACACGCAGCATTGGAAC 1930051 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207 ||||||||| ||||| ||||| || || ||| || || || ||||||||||||| Sbjct 1930050 AATACCATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATTGTG 1929991 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 || || | ||| ||||| || || ||| || | || || || || || || Sbjct 1929990 AACAGAAACACCAATTCCACCGGCTGATTTGCTAATGATAGCACACTCCTTCAAAGTGTC 1929931 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATG 80298 ||| || |||||||| |||||||| ||||| Sbjct 1929930 ATATATTCCCTCTATACTATCATCTTTCATG 1929900 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 |||||||||||| || || || | | || || || || |||||| ||| | || || Sbjct 1930579 TTCTCTTTCGTACTGAGTGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCCAAACC 1930520 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 ||| |||| | || || | ||| ||||| | |||| || |||| || |||||| Sbjct 1930519 TGGAGATTCATTGGGGCAAAACAAAGACCATTGCCCATTGCTCTGAACTCTTTCCATAAA 1930460 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 80003 ||||||||| | ||||||||| ||| | |||||| | | |||||| || Sbjct 1930459 GAGATCAGGCACCCAAAGAGCATAAAACAAATCTCTAGCACGATGCTCTTC 1930409 >seq25 Length=312266 Score = 86.0 bits (94), Expect = 9e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 ||| |||||||| | || | || || | ||| | || | |||||||||| ||| || Sbjct 242285 TCCCCCCTGATCAACATAGCGGGCAGTATCATTGAACACACGTAACATTGGAACAATGCC 242226 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||||| || ||||| ||||| ||||| || || | |||||||| || | || Sbjct 242225 GTTGGACGTCCCATTTGTCCCACGAATATAACTGCCGGTAGCACGAATGTTGTGGACAGA 242166 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAAT-GCGCATCGTTTTAACGTATCATAGA 80272 | ||| ||||| || || ||| | | |||| || || || || || ||||| | Sbjct 242165 GACACCAATTCCTCCAGCTGATTT-GCTAATAATAGCACACTCCTTCAAAGTTTCATATA 242107 Query 80273 TGCCCTCTATGCTATCATCAATCATG 80298 | |||||||||||||||||| ||||| Sbjct 242106 TCCCCTCTATGCTATCATCATTCATG 242081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717933233795000