Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31]
37,375 sequences; 467,300,602 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 3e-14
>seq1
Length=42234885
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960
||||| |||| |||| |||||||| | |||||||| | | || | | |||| ||
Sbjct 37703232 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCA 37703291
Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020
| |||||| || || ||||||| | ||| ||||| | || | ||||||||| || |
Sbjct 37703292 AGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGG 37703351
Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080
||| | || || | ||| || ||| | || || || | || |||||||||
Sbjct 37703352 ATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCACCTCGAGTGTGATAGTTTTT 37703411
Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||| | ||||||||| || ||||||||
Sbjct 37703412 CCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || || || ||||| || | |||| ||||| || | || ||||| |
Sbjct 37712424 GCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGTATGTTATAATCCGC 37712483
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| || | | |||| || | ||||| |||||||| || | | ||| ||||| | ||
Sbjct 37712484 AAGGGTCCTTCCGTCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGG 37712543
Query 43002 CACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| ||| || || || |||| || |||| || || ||| ||| || | ||| |
Sbjct 37712544 GATACCCTCCTTATC-CTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAACTCTCCA 37712602
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || | ||||| || ||||| || | ||| || ||||||||||||||
Sbjct 37712603 CTTCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCAT 37712651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381195883167750
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |