Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 seq1 102 1e-16 >seq3 Length=41204908 Score = 134 bits (148), Expect = 2e-26 Identities = 379/577 (66%), Gaps = 4/577 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| |||||||| || || ||||||| || | ||||||||| || ||||| Sbjct 34261340 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGA 34261281 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGAAAAGAA 42183 |||||||| | ||||||||| || ||||||||||| || ||| | | | || || ||||| Sbjct 34261280 CCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCGA-GCAGAAGCTGCCGGAGAAGAA 34261222 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTAT 42243 |||||| || || || ||||| | || | ||| | | | | || ||| || Sbjct 34261221 GATTCCCTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGGTGGCATCGAT 34261162 Query 42244 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303 ||| ||||| | ||||||||| ||||| || || || || | ||| || Sbjct 34261161 CCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAA 34261102 Query 42304 GAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTC 42363 || | || ||||| | ||||| | || || || | | ||||| ||||| || Sbjct 34261101 CAGGTGATTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTC 34261042 Query 42364 TGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTG 42423 || || ||||| || ||||| ||||| || ||||||||| | ||||||| | || Sbjct 34261041 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGAGCCTCGGCGGCTTG 34260982 Query 42424 TACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483 | ||| | || || |||| | |||||| || || ||||| ||| ||||| Sbjct 34260981 GATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAA 34260922 Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTA-TTCCAATCAT 42542 || || | | || | || || | ||| ||| | | | | | ||| | Sbjct 34260921 GAAGGCGAGGATGTGGGTGATGAAGTGGCGCTCG-CCGTCGGTGAGGGAGTCCCAGTGGC 34260863 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 || |||| || | || || ||||| | ||||| || || ||||| || || || | Sbjct 34260862 GGAGGTCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAGAAAGAAGCTTCGGCTTTCTTGT 34260803 Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAAT 42639 |||| | |||||| | | ||||| |||||||| || Sbjct 34260802 ACATTTCCCAGATTTGGGGGTATTGGATTGGGAACAT 34260766 >seq1 Length=42234885 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227 || |||| ||| || ||||| | ||| | ||| || | ||| | || | || |||||| Sbjct 1930113 CCTTTTGCCTCCCCCTTGATCCACGTAACGAGCAGTATCATTGAACACACGCAGCATTGG 1930054 Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 72287 || ||||||||| |||| ||||| || || ||| || || || ||||||||||||| Sbjct 1930053 AACAATACCATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATT 1929994 Query 72288 GCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 72347 | || || | ||| ||||| || || ||| || | || || || || || Sbjct 1929993 GTGAACAGAAACACCAATTCCACCGGCTGATTTGCTAATGATAGCACACTCCTTCAAAGT 1929934 Query 72348 ATCATAGATGCCCTCTATACTATCATCCATCATG 72381 ||||| || ||||||||||||||||| ||||| Sbjct 1929933 GTCATATATTCCCTCTATACTATCATCTTTCATG 1929900 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 71916 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 |||||||||||| || || || | | || || || || |||||| || | || || Sbjct 1930579 TTCTCTTTCGTACTGAGTGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCCAAACC 1930520 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 ||| ||||||| || || | ||| ||||| | |||| | |||| || |||||| Sbjct 1930519 TGGAGATTCATTGGGGCAAAACAAAGACCATTGCCCATTGCTCTGAACTCTTTCCATAAA 1930460 Query 72036 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 72086 ||||||||| | ||||||||| ||| | |||||| | | |||||| || Sbjct 1930459 GAGATCAGGCACCCAAAGAGCATAAAACAAATCTCTAGCACGATGCTCTTC 1930409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670825652155000