Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 145 1e-29 >seq3 Length=41204908 Score = 145 bits (160), Expect = 1e-29 Identities = 380/563 (67%), Gaps = 24/563 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||||||||||||| || || | || || || ||||| | ||||||||| || || Sbjct 34260790 ATCTGGGAAATGTACAAGAAAGCCGAAGCTTCTTTCTGGACCGCCGAAGAGGTTGACCTC 34260849 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||| | ||||| | | ||||| | | | || || ||||| | || || | Sbjct 34260850 TCCCAAGACCTCCGCCACTGGGACTCCC---TCACCGACGGCGAGCGCCACTTCATCACC 34260906 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | ||||||||||||| |||||| || ||||| ||| || || | || | || Sbjct 34260907 CACATCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCTGCC-CG 34260965 Query 125198 ATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTT-TACGGATTCCAAATCAT 125254 ||| | || | ||| || |||| ||||||||| ||||| ||||| ||| Sbjct 34260966 CTTCATGAAGGAAAT--CCAAGCCGCCGAGGC-TCGTGCTTTCTACGGCTTCCAGATCGC 34261022 Query 125255 GATTGAGAACGTGCACTCGGAAATGTAC--TCTACACTGATTGACATGTACATTCGCGAT 125312 || |||||| | ||||| || |||||| ||| | || | || | ||||| || Sbjct 34261023 CATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCT--TGGAAACCTACATCAAAGAC 34261080 Query 125313 CCGCAACGTAAACACATG--CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 | || || ||| | || || || ||| |||| || | || | | | || | Sbjct 34261081 TC-CACCGAAAAGA-ATCACCTGTTCCGCGCCGTCGATACCATCCCCTGTGTCGCCAAGA 34261138 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 |||| ||||||| | || |||||||||| | | | || | |||||| | || | Sbjct 34261139 AGGCCCAATGGGCCTTGCGCTGGATCGATGCCACCGACTCCTT---CGCCGAGCGCCTCG 34261195 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGG 125489 | || |||||| ||| ||||| |||||||| || || || || ||| | || |||||| Sbjct 34261196 TCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGCTTCTGCT-CGATATTTTGG 34261254 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || | |||||||| || || | ||||| | || || ||||| Sbjct 34261255 CTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATCTCGCGAGAT 34261314 Query 125550 GAGGGCCTACACTGTGACTTTGC 125572 || || || ||||| ||||| || Sbjct 34261315 GAAGGGCTTCACTGCGACTTCGC 34261337 Score = 125 bits (138), Expect = 1e-23 Identities = 373/560 (67%), Gaps = 18/560 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||||||||||||| || || | ||||| || ||||||| || ||||| || || Sbjct 26200890 ATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGGACGGCGGAGGAGGTGGACCTC 26200831 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| | | ||| | |||| | || || ||||| | || | | Sbjct 26200830 TCGCAGGACATCAGTCACTGGAACACTCTT---ACCGACGGCGAGCGCCATTTCGTCACC 26200774 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA-CG 125197 || | | |||||||| |||| |||||| || ||||| || || || || | | Sbjct 26200773 CATGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTAGAAAACCT--TGCCGGCC 26200716 Query 125198 ATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGC-TTTTACGGATTCCAAATCAT 125254 || | | ||| | | ||| || | |||| ||| || |||||||| ||||| ||| Sbjct 26200715 GTTTTATGAAG-GAGGTCCAGGTCTCCGAGGC-TCGCGCCTTTTACGGCTTCCAGATCGC 26200658 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA-TC 125313 || |||||| | ||||| || |||||| || | || | ||||| || || Sbjct 26200657 TATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTC 26200598 Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || | | |||| | | |||||| |||| || ||||| | || | | || |||| Sbjct 26200597 CGTAGAGAAAACCCGT-CTCTTTCACGCCATTGACACCATTCCCTGCGTCACCAAGAAGG 26200539 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | || |||||||| | | |||| | |||||| | || || | Sbjct 26200538 CCAACTGGGCCCTCCGCTGGATCGACTCCTCCGAGTCCTT---CGCCGAGCGCCTCGTCG 26200482 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG-TTTTGCGGCCATCTTTTGGCTC 125492 | || ||| ||| ||||| |||||||| || || || |||||| ||||||| |||||| Sbjct 26200481 CCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGCTTTTGCT-CCATCTTCTGGCTC 26200423 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||| || || |||||||| ||||| || | ||||| | || || || |||||| Sbjct 26200422 AAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAACGAACTCATCTCCCGCGACGAG 26200363 Query 125553 GGCCTACACTGTGACTTTGC 125572 || || || || ||||| || Sbjct 26200362 GGTCTCCATTGCGACTTCGC 26200343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740712986405000