Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 122 6e-23 seq109 82.4 6e-11 >seq1 Length=42234885 Score = 122 bits (134), Expect = 6e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 |||| || |||||||| ||||| || || || ||||| ||||| || | | | | Sbjct 37702770 CTTAGCACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCA 37702829 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||||| || || ||||| | || | | ||| || || |||||| || |||||| Sbjct 37702830 TCTTCTAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGATCTGGTGGAATCCCCTCTTTG 37702889 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || || || ||||||| | || |||||||| | |||| || || ||||||||| Sbjct 37702890 TCCTGTATCTTAGCCTTTACATTATCAATGGTATCAGAACTTTCAACCTCCAAGGTAATG 37702949 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || |||||||| || |||||||||||||| Sbjct 37702950 GTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 37702984 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| |||||||| | | || ||||| |||||||| || || || || |||||||| Sbjct 37707174 TGCCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAG 37707233 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | || || | |||||| |||||| | |||| | || ||||| | Sbjct 37707234 CAAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAG 37707293 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || |||||||| || ||| ||||||| | || ||||| || | | || | Sbjct 37707294 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTCTCGA 37707353 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | |||||||||||| || |||| ||| || ||||| |||||||| Sbjct 37707354 CCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | | || || || ||||| || || || || || |||||||| Sbjct 37712653 CCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGCA 37712712 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | || | || || | |||||| |||||| | || | | || || || || Sbjct 37712713 AGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGGG 37712772 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| |||||||| || ||| ||| ||| | || |||||||| | | || || Sbjct 37712773 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACC 37712832 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| |||||||| || |||| ||| ||||||||||| |||||| Sbjct 37712833 TCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCATA 37712880 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 || || || || || || || || || || || ||||| ||||| || ||| | | Sbjct 37706732 CTCAACACCAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTTCGCCCA 37706791 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | || || ||||| | || | | ||| ||||| |||||| || |||||| Sbjct 37706792 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATCCCCTCTTTG 37706851 Query 15269 TCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || ||| ||||| ||||||| | || |||||||| |||| || || || ||||| Sbjct 37706852 TCCTGAATCTTTGC-CTTTACATTATCAATGGTATCAGAGCTTTCAACCTCCAAAGTAAT 37706910 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || |||| || ||||||||||||||||| Sbjct 37706911 GGTCTTTCCAGTCAACGTCTTTACAAAAATTTGCAT 37706946 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||||| ||||| || |||||||| || || || | | | ||||| ||||| Sbjct 37712221 TGAAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGG-TACGACCATCTTCCAATTG 37712279 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || ||||| | || | | || || || ||| || || || ||||| ||| || Sbjct 37712280 CTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTT 37712339 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 |||| ||| | || || ||||| |||| || || |||||||||||||| ||||| Sbjct 37712340 TGTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCTGT 37712399 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 |||||| || |||||||| ||||| Sbjct 37712400 CAGAGTCTTCACAAAAATCTGCAT 37712423 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || ||||| | | ||| || || || ||||| || ||||| ||||||||||| Sbjct 37703212 TGCCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAG 37703271 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| |||| || | |||||| |||||| | |||| | || || || | Sbjct 37703272 CAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAG 37703331 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||||||||| || || ||| ||| | || ||||||||| ||| | Sbjct 37703332 GGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCA 37703391 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | || || ||||| || |||| |||||| || || |||||||| Sbjct 37703392 CCTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||||| || ||||| ||||||||||| || | | | || || | ||| Sbjct 6126237 TGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGACCATCCTCAAGCTGT 6126296 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 |||||||| | || | |||||| ||||| ||| |||||||| ||||| ||| ||| Sbjct 6126297 TTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTG 6126356 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 || ||| | || |||||||| | ||||| || | || ||||| ||||| || Sbjct 6126357 GCTTTCACATTATCAATGGTATCTGAGCTCTCTACTTCGAGAGTGATGGTCTTACCGGTG 6126416 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 ||||| || || || |||||||| Sbjct 6126417 AGAGTCTTAACGAAGATTTGCAT 6126439 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| ||||| || ||||||||||| ||| | ||| | || || ||||| Sbjct 6125553 TGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTCCCATCCTCCAATTGC 6125612 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || || || ||| |||||||| ||||| ||||| Sbjct 6125613 TTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTTT 6125672 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || || ||||| |||| || || || || || || || ||||| Sbjct 6125673 GCCTTGACGTTATCAATTGTATCTGAGCTTTCAACCTCCAAAGTGATAGTCTTCCCTGTT 6125732 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | ||| || ||||| || |||||| Sbjct 6125733 AAAGTCTTCACAAAGATCTGCATA 6125756 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 || ||||| || || ||||| || ||||| || ||||||||||| || |||| | Sbjct 37706960 CTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGGGTTCTTCCA 37707019 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | ||||| || || | || | | || ||||| || || || || || Sbjct 37707020 TCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTA 37707079 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || ||| ||| || ||| | || |||||||| | | || || |||||||| ||| Sbjct 37707080 TCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACCTCTAAGGTTATG 37707139 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||| ||| || ||||| |||||||| Sbjct 37707140 GTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 37707174 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219 || |||||||| || || || |||||||| || || || | | | ||||| ||||| Sbjct 37706516 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 37706574 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278 ||| ||||| | || | | || || || |||||| || || ||||| ||| || Sbjct 37706575 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTT 37706634 Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 |||| || ||| | || || ||||| | || || || ||||||||||| || |||| Sbjct 37706635 TGCT-TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTG 37706693 Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||| || ||||| || ||||| Sbjct 37706694 TCAGAGTCTTCACAAATATCTGCAT 37706718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| | | || ||||| || || || ||||| || || |||||||| ||||| Sbjct 37712423 TGCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGTATGTTATAATCCG 37712482 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | || ||||||| | ||||| || || | || | | || || || | Sbjct 37712483 CAAGGGTCCTTCCGTCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGG 37712542 Query 15255 GAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 | || || || || || ||| |||||| || ||| | || || ||||| | | || Sbjct 37712543 GGATACCCTCCTTATCCTGAATCTTTGCT-TTCACATTGTCAATTGTATCTGAACTCTCC 37712601 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| ||||| || ||||||| ||| || ||||||||||||||| Sbjct 37712602 ACTTCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCATA 37712652 >seq109 Length=622178 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || || ||||| || || | ||| | ||||| ||||| Sbjct 289265 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTCCTCCCATCTTCCAATTGC 289324 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | |||| | || ||||| ||||||||| || ||||| |||||| Sbjct 289325 TTCCCTGCGAAGATCAGCCTCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATTTTC 289384 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || || | | || || || | || || || || || ||| Sbjct 289385 GCCTTCACATTGTCAATAGTGTCAGAACTCTCAACCTCCAGAGTGATTGTCTTCCCAGTC 289444 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | || || |||||||| ||||| Sbjct 289445 AAGGTCTTCACAAAAATCTGCAT 289467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362014224544875