Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 >seq1 Length=42234885 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || ||||| | ||| || |||| |||||| ||||||||||| || ||||| |||||||| Sbjct 37702986 CCACCTCGAAGCCTCAAAACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAATCCGCA 37703045 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || |||||||| || ||| | ||||| ||||||||||| ||| Sbjct 37703046 AGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCGGGGGGA 37703105 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| || || ||| || ||| || | | | ||||| | |||| Sbjct 37703106 ATACCCTCCTTATCCTGAATCTTGGCTTTGACATTATCAATGGTATCTGAACTCTCCACC 37703165 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | |||||| ||||| || || ||||| |||||||| |||||||| Sbjct 37703166 TCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37703212 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || || | ||| || |||| ||||| || || ||||| || || || |||||||| Sbjct 37712425 CCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGTATGTTATAATCCGCA 37712484 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | |||| || |||||||| || ||| | ||||| ||||||||||| ||| Sbjct 37712485 AGGGTCCTTCCGTCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGG 37712544 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| || || ||| || ||| || | | | | ||||| | |||| | Sbjct 37712545 ATACCCTCCTTATCCTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAACTCTCCACT 37712604 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct 37712605 TCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCAT 37712651 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| | | ||||| ||||| || |||||||| |||||||||||||| || Sbjct 37712653 CCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGCA 37712712 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | | ||||| || |||||||| || ||||||| ||||||||||| || Sbjct 37712713 AGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGGG 37712772 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||||||||| || || || || | | | ||||| | |||| Sbjct 37712773 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACC 37712832 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| |||||||| || || ||||| || |||||||| ||||| Sbjct 37712833 TCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 |||| || || | ||| || |||| ||||| ||||| || || || || |||||||||| Sbjct 37706946 TTCCCCCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCG 37707005 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | | ||| | | || || |||||||| || ||| | ||||| |||||||| || || Sbjct 37707006 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 37707065 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | ||||| || || ||| || ||| || | | | ||||| | |||| Sbjct 37707066 GGATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCA 37707125 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| ||||| || || || ||||| |||||||| |||||||| Sbjct 37707126 CCTCTAAGGTTATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 37707174 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 18824 AACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTG 18883 |||| | ||||| ||| | || |||||||| |||||||||||||| || | ||| | Sbjct 37712890 AACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTC 37712949 Query 18884 GCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCT 18943 | ||||| ||||||||||| ||| |||| || || ||||||||| || | |||||| Sbjct 37712950 CCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGGGATACCCTCT 37713009 Query 18944 TTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTA 19003 ||||| || || || || | | | || || | || ||| | ||| Sbjct 37713010 TTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTT 37713069 Query 19004 ATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||||| || || || |||||||| ||||| || ||||| Sbjct 37713070 ATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || || ||||||||||| |||||||| || | ||| | ||||||| Sbjct 37703232 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCA 37703291 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 || |||||||| || |||| || |||||||||||| || | || |||||||| Sbjct 37703292 AGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGG 37703351 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || | | | |||||| | ||| |||| || || ||||| Sbjct 37703352 ATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCACCTCGAGTGTGATAGTTTTT 37703411 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || |||||||| || || |||||||| Sbjct 37703412 CCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 |||| ||||| ||||| ||||||||||| || |||| || | ||||||| || Sbjct 37702326 TGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTACGACCATCCTCCAATTGC 37702385 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || ||| ||||||| ||||||||||| || | ||||| ||||| ||| || Sbjct 37702386 TTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTT 37702445 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 || || | ||| ||||| |||| || | |||||||||||| ||||| Sbjct 37702446 GCCTTCACATTATCGATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTC 37702505 Query 19019 AAAGTTTTGACAAAAATTTGCATT 19042 | ||| || ||||| || |||||| Sbjct 37702506 AGAGTCTTCACAAATATCTGCATT 37702529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414383958850750