Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=42234885 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||||| || || ||| ||| |||||||| || ||||| | ||| |||| || Sbjct 6126230 CACCAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGACCATCCTC 6126289 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | ||||| || ||||| || | |||||||||||| | || | ||||| || ||| Sbjct 6126290 AAGCTGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTG 6126349 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| || ||| || || ||| ||||||| ||| || |||| || || || || Sbjct 6126350 AATCTTGGCTTTCACATTATCAATGGTATCTGAGCTCTCTACTTCGAGAGTGATGGTCTT 6126409 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||| | |||||| || || |||||||| Sbjct 6126410 ACCGGTGAGAGTCTTAACGAAGATTTGCAT 6126439 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || |||| || || ||| |||||| ||||| || ||||| | | | |||| Sbjct 6125544 AATACCAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTCCCATCC 6125603 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||||||| || || ||||| ||||||| ||||| || | || | ||||| || || Sbjct 6125604 TCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCC 6125663 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 |||||| ||||| || ||| ||||||| || || || | || || || Sbjct 6125664 TGGATTTTTGCCTTGACGTTATCAATTGTATCTGAGCTTTCAACCTCCAAAGTGATAGTC 6125723 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || ||||||||||||||||| || ||||| Sbjct 6125724 TTCCCTGTTAAAGTCTTCACAAAGATCTGCAT 6125755 Score = 86.0 bits (94), Expect = 4e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 43907 CTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTG-ACGCTC 43965 || |||||||| || || ||| ||||| || || |||||||| | || | |||| | Sbjct 37702542 CTCAACACCAAGTGCAGAGTGGATTCTTTCTGGATGTTATAATC-TGCAAGGGTACGCCC 37702600 Query 43966 ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTT 44025 ||| ||||| || || || ||||| || | | ||||||||| | || | ||||| || Sbjct 37702601 ATCTTCCAACTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCCGGTGGGATGCCTTCCTT 37702660 Query 44026 ATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAAT 44085 || ||| ||| || || | ||| ||| || | || || || | || || Sbjct 37702661 GTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCAACCTCCAAAGTTAT 37702720 Query 44086 TGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| || ||||||||||||||||| || ||||| Sbjct 37702721 GGTTTTCCCAGTTAAAGTCTTCACAAAAATCTGCAT 37702756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 43907 CTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCA 43966 || || ||||| || | || ||| || || ||||||||||| | | || Sbjct 37702998 CTCAAAACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAATCCGCAAGGGTTCTTCCA 37703057 Query 43967 TCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTA 44026 || || | ||||| || ||||| || | || ||||| || | || | ||| || ||| Sbjct 37703058 TCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCGGGGGGAATACCCTCCTTA 37703117 Query 44027 TCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATT 44086 || ||| || |||||| || ||| ||||||| |||||| || | ||||| Sbjct 37703118 TCCTGAATCTTGGCTTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATA 37703177 Query 44087 GTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||| ||||| |||||||| ||||| ||||||||| Sbjct 37703178 GTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATG 37703213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354615996031500