Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq261 143 4e-30 seq383 120 5e-23 seq8 113 7e-21 seq1 96.9 5e-16 seq9 91.5 2e-14 >seq261 Length=1007136 Score = 143 bits (158), Expect = 4e-30 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||| || ||||| |||||||| || || || ||||| ||| | |||||||| || Sbjct 540563 GATAACATTCAGGGAATAACCAAGCCCGCGATTCGCCGTCTCGCTAGACGTGGTGGCGTT 540622 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 || ||| || ||| | |||| ||||| | ||||| |||| | |||||||| ||| || Sbjct 540623 AAACGTATCAGTGGTCTCATCTACGAAGAAACTCGTGGTGTTCTCAAGATCTTTCTCGAG 540682 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| || ||| || ||| |||||||| ||| || ||||||||||| || Sbjct 540683 AACGTGATCCGAGACGCTGTCACCTACACCGAGCATGCTCGCCGCAAGACTGTCACTGCC 540742 Query 16640 ATGGATATCGTCTATGC 16656 |||||| | ||||| || Sbjct 540743 ATGGATGTTGTCTACGC 540759 >seq383 Length=513819 Score = 120 bits (132), Expect = 5e-23 Identities = 177/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| ||||| || || ||||| ||||| || ||||| || ||| | ||||| | || Sbjct 128113 TCTTCGTGATAATATTCAGGGAATTACCAAACCTGCTATTCGCCGTTTAGCTCGCAGAGG 128054 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| | |||| || || | |||| ||| | |||||||| Sbjct 128053 TGGTGTGAAGAGAATCAGTGGTCTCATCTACGAGGAAACCCGTGGTGTGCTTAAGATCTT 127994 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | || || | ||||||| | ||| || ||||| |||| | |||||||| Sbjct 127993 CCTTGAAAATGTCATTCGTGATGCTGTTACCTACACTGAGCATGCTAGGAGGAAGACTGT 127934 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || |||||||| | || |||||| | || | |||||| | | | || |||||||| Sbjct 127933 TACTGCCATGGATGTTGTTTATGCACTTAAGAGACAAGGCAGAACCCTCTACGGTTTTGG 127874 Query 16693 AAGTTAATCTT 16703 |||||| || Sbjct 127873 TGGTTAATTTT 127863 >seq8 Length=30791815 Score = 113 bits (124), Expect = 7e-21 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || ||||| || ||||| || || || ||| |||||||| | ||||| Sbjct 25982467 CGTGACAACATTCAGGGAATAACGAAGCCTGCCATTCGGCGTTTGGCTCGTAGAGGTGGT 25982526 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | || | |||| ||||||| ||| | |||| |||||||||| || Sbjct 25982527 GTCAAGCGTATAAGCGGTCTAATCTACGAAGAGACTCGCGGTGTTCTGAAGATCTTTCTT 25982586 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | ||| || | || ||||||||||| | | | ||||| || || Sbjct 25982587 GAGAACGTGATTCGTGACGCAGTTACGTACACCGAGCACGCCAGAAGAAAGACGGTTACG 25982646 Query 16637 TCCATGGATATCGTCTATGC 16656 | |||||| | || ||||| Sbjct 25982647 GCAATGGATGTGGTTTATGC 25982666 Score = 102 bits (112), Expect = 1e-17 Identities = 172/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || ||||| || || || || || || || || || || ||||| | | || Sbjct 3418778 TCTTCGGGACAACATTCAGGGCATAACGAAACCGGCGATTCGGCGATTGGCTAGAAGAGG 3418719 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||||||| | |||||||||| | | || ||||||| || Sbjct 3418718 TGGCGTGAAGAGGATCAGTGGATTGATTTATGAAGAGACCAGAGGAGTGCTGAAGATATT 3418659 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | || || | || ||| | ||||||||||||||||| | |||||||| Sbjct 3418658 CCTGGAAAATGTGATTCGCGACGCTGTGACCTATACCGAGCACGCTAGGAGGAAGACTGT 3418599 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || ||||||| | || ||||| |||| | || || | | | ||||||||||| Sbjct 3418598 TACGGCCATGGACGTGGTGTATGCGCTGAAGAGACAGGGAAGGACTCTCTATGGTTTTGG 3418539 Query 16693 AAGTTAATC 16701 | | | ||| Sbjct 3418538 AGGCTGATC 3418530 Score = 89.7 bits (98), Expect = 8e-14 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || || || || || || || || | || |||| | | ||| Sbjct 6701749 CTTCGCGATAACATTCAGGGCATAACGAAACCGGCAATTAGGCGATTGGCGAGAAGAGGT 6701690 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || ||||||| | ||||| |||| | | || ||||||| ||| Sbjct 6701689 GGTGTGAAGAGAATCAGTGGATTGATTTATGAGGAGACGAGGGGAGTGCTGAAGATTTTC 6701630 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | |||||| | ||| || ||||| |||| | |||||||| Sbjct 6701629 TTGGAGAACGTAATTCGCGATGCTGTGACCTACACTGAGCATGCTAGGAGGAAGACTGTT 6701570 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || ||||||| | || ||||| |||| | || || | | ||||||||||||| Sbjct 6701569 ACGGCCATGGACGTGGTGTATGCCCTGAAGAGACAGGGAAGGACCCTTTATGGTTTTGG 6701511 >seq1 Length=42234885 Score = 96.9 bits (106), Expect = 5e-16 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || ||||| || ||||| || || || || |||||||| | ||||| Sbjct 4449020 CGTGACAACATTCAGGGAATAACGAAGCCTGCCATTCGGTGTTTGGCTCGTAGGGGTGGT 4448961 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | ||| | |||||||||||| ||| | |||| |||||||||| || Sbjct 4448960 GTCAAGCGTATAAGTGGTCTTATCTATGAAGAGACTCGCGGTGTTCTGAAGATCTTTCTT 4448901 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | ||| || | || ||| ||||| | | | | ||||| | || Sbjct 4448900 GAGAACGTGATTCGTGACGCAGTTACGTACACCAAGCACACCATAAGAAAGACAATTACG 4448841 Query 16637 TCCATGGATAT 16647 | ||| |||| Sbjct 4448840 GCAATGAATAT 4448830 >seq9 Length=31747250 Score = 91.5 bits (100), Expect = 2e-14 Identities = 164/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || ||||||||||| || || || ||||| || || || ||| | |||| | | ||| Sbjct 16886171 CTCCGAGATAACATTCAGGGCATTACCAAACCTGCCATTCGTAGATTGGCCAGAAGAGGT 16886230 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || || | || || ||| | || ||||| | | | | || ||||||| ||| Sbjct 16886231 GGCGTGAAAAGAATCAGCGGTTTGATATACGAAGAAACTAGAGGAGTGCTGAAGATATTC 16886290 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | ||||||| | || |||||||| |||| | ||||||||| Sbjct 16886291 TTGGAGAATGTAATTCGTGATGCTGTAACTTACACCGAGCATGCTAGGAGGAAGACTGTC 16886350 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| | || ||||| ||||| || || || | | | |||||||| ||| Sbjct 16886351 ACTGCAATGGATGTTGTTTATGCCTTGAAGCGACAGGGAAGGACTCTCTATGGTTTCGGA 16886410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79041027775875