Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq37374 618 6e-172 seq9 230 3e-55 seq6 215 6e-51 seq5 118 1e-21 seq456 91.5 2e-13 seq10 89.7 6e-13 >seq37374 Length=151683 Score = 618 bits (684), Expect = 6e-172 Identities = 716/958 (75%), Gaps = 8/958 (1%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | ||||||||||| || || || || | || |||||||| || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCACC 135492 |||||||||||| | | | || || |||| |||||| | ||||| |||||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552 ||| || |||||||| || || || || |||||| |||| |||||| | || ||||| || Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 135553 CATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCAT 135612 ||||| |||||||| |||| ||| || || || || | || || ||||| || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 135613 CTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGT 135672 |||||||| |||||| ||||||| ||| |||| || || ||||||||| ||||| | || Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 135673 CTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCG 135732 | |||||| | | ||||| | ||||||||||| ||||||||||| || || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 3954 Query 135733 ACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGC 135792 ||||||||||| ||||||||| ||| || || ||||| |||||||| || |||||||| Sbjct 3953 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGC 3894 Query 135793 TGTTTTCCTGGTCTACCCCTTTGGACAAGGTT-CTTTCAGTGATGGTATGCCGCTTGGCA 135851 ||||||| || |||| || |||| ||||| |||| | ||||||||||| || || | Sbjct 3893 TGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCG-GATGGTATGCCTCTAGGAA 3835 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 ||||||| ||||| || | ||| |||| || ||||| || || || ||||| ||||||| Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | || |||||||| || || ||||| || ||||| || || || ||| ||||||||||| Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || || |||||| | | | || || || || |||||| || | | Sbjct 3714 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 |||||| || |||||||| ||||| ||||| || ||||| |||||||||||||| || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || |||||||||||||||| |||||||| |||||||| |||| || ||||| | Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCT--ACGATGGCGTT 136209 ||||||||||||| || ||||| |||||| | || | || |||| || ||||| || Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGG--TATCAGCACTATGGCTTT 3477 Query 136210 CAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAA 136269 |||| | ||||| || || |||||||| ||| | || | | ||||||||||| | || Sbjct 3476 CAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAA 3417 Query 136270 CACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 |||||||| ||| | | || || ||| || |||||||| || ||||| || ||| Sbjct 3416 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGT 3359 Score = 585 bits (648), Expect = 3e-162 Identities = 735/1006 (73%), Gaps = 6/1006 (1%) Strand=Plus/Minus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || || || |||||||||||||| || ||| |||| | Sbjct 31151 TGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCT 31092 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| || ||||| ||| | || || ||| |||| || || || ||||| || | Sbjct 31091 TTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCAT 31032 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTG 138054 |||| || ||||| ||||| | |||| | |||||| || ||| | || || || | Sbjct 31031 GGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAG 30972 Query 138055 TTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 138114 |||| ||||| ||| || | | | || ||| | | |||| ||||||||||| | | Sbjct 30971 TTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 30912 Query 138115 AAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 138174 | |||||| | ||| |||| || | || || || ||||||||||| || ||||||| Sbjct 30911 AGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACG 30852 Query 138175 GGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGC 138233 | || || | | || || |||||| | || || ||||| | |||| |||| | | Sbjct 30851 GTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTT---C 30795 Query 138234 A--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGT 138291 | | || || || || |||||||||||||| ||||| || ||||| || || || | Sbjct 30794 AATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTAT 30735 Query 138292 TCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAG 138351 | || || ||||| ||||||| || |||||||||||||||| |||||||| |||| Sbjct 30734 TTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAG 30675 Query 138352 CAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTC 138411 | || || |||||| | | || | || || || ||||| ||||| | ||||| |||| Sbjct 30674 CTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTC 30615 Query 138412 ATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTA 138471 |||||||||| || || ||| | | || | ||| || || || |||||||||||||| | Sbjct 30614 ATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAA 30555 Query 138472 CAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAAC 138531 | |||||||||||||| | ||||||||| || ||||||| || || ||| | | Sbjct 30554 CCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 30495 Query 138532 CTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCT 138591 | || |||| |||||||| |||||||||||||||||||| || | ||||| ||||||| Sbjct 30494 CAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCT 30435 Query 138592 TTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCA 138651 |||| |||||||| ||||| |||||| | || ||||||||| | ||||| || || | Sbjct 30434 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 30375 Query 138652 TGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGTATG 138711 ||| | |||| ||| | |||| | | ||| | || || ||| |||| || |||| Sbjct 30374 CTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATG 30315 Query 138712 ATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCA 138771 | ||||| || |||||||| || ||||| |||||||||||||| ||||| |||||||||| Sbjct 30314 ACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCA 30255 Query 138772 AGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTCACG 138831 | || ||||| | || |||||| | ||||| |||||||| || ||||| ||||| | Sbjct 30254 AAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATG 30195 Query 138832 AAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 ||||| || | || ||||| || || | ||| | || |||||||| Sbjct 30194 AAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 >seq9 Length=31747250 Score = 230 bits (254), Expect = 3e-55 Identities = 238/312 (76%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 138309 GGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTG 138368 ||||| || |||||||||||||||| |||||||| ||||| || || |||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 138369 TTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTCATATGATGGGCGTAGCA 138428 | || | || || || ||||| ||||| | ||||| |||||||||||||| || || Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 138429 GGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTG 138488 ||| | | || | ||| || || || |||||||||||||| || |||||||||||||| Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 138489 TATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAA 138548 | ||||||||| || ||||||| || || ||| | || || |||| ||| || Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 138549 ACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGT 138608 || |||||||||||||||||||| || | ||||| ||||||||||| |||||||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 138609 AATAAGCGTTGG 138620 ||||| |||||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq6 Length=19356003 Score = 215 bits (238), Expect = 6e-51 Identities = 293/404 (73%), Gaps = 10/404 (2%) Strand=Plus/Plus Query 135929 GTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCT 135988 || ||||| || ||||| || || || ||| | ||||| |||| || | || || ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 135989 AGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAA 136048 ||| | || | || || || || |||| || | |||||||| || |||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 136049 GAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAA 136108 |||||||| ||||| || ||||| |||||||||| || || || || ||||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 136109 TATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTC 136168 ||||| |||||||| |||||||| ||| || ||||| |||||||||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 136169 GGTATCTGGTTTGCTGCCCTGGGCGTATC--TACGATGGCGTTCAACCTCAATGGATTCA 136226 ||||| |||||| | || | | ||||| || |||| |||||| | ||||| || | Sbjct 3411014 GGTATTTGGTTTACCGCTTTAG--GTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 136227 ACTTCAACCAGTCC---ATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATG 136283 | |||||||| ||| |||| || || ||||||||||| | || |||||||| ||| Sbjct 3411072 ATTTCAACCAATCCGTAATTG-ATAGTC--AAGGTCGTGTAATAAATACCTGGGCTGATA 3411128 Query 136284 TGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 | | || || ||| || |||||||| || ||| | || ||| Sbjct 3411129 TTATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGT 3411172 >seq5 Length=30687117 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 136031 GGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTC 136090 ||||||| || |||||||| ||||| ||||| || |||| ||||||||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 136091 GGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTT 136150 || || |||||||||||||| | ||||| | | ||||| |||| || || || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 136151 GCTGCTTGGCCTGTTGTCGGTATCTGGTTT 136180 |||||||||||||| || ||||| |||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTT 28538892 >seq456 Length=558995 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 136083 GTTACTTCGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACT 136142 |||| || || || |||||||||||||||| |||||||| |||||||| |||| | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 136143 TTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGG 136177 | ||||| |||||||||||||| || ||||| ||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 >seq10 Length=40424437 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/203 (71%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 135522 CTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTATCCCTTC-- 135579 || || |||| |||||| | || ||||| || ||||| | |||||| || |||| Sbjct 28818842 CTCTTTCTGGATCTCTACTTTATGGAAACAATATCATTTGTGGTGCAAATAGTCCTTACG 28818901 Query 135580 TA-GCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGATGA-- 135636 || | ||| | || | || || ||||| | || |||||| |||||| ||||||| Sbjct 28818902 TATGTAACTGTA--GGTTTGCATTTTTATCCAACCTAGGAAGCAGCTTCTGTTGATGAAT 28818959 Query 135637 -GTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGTCT 135695 |||| ||| || |||||||||||| ||||| | || | |||||| | | ||||| Sbjct 28818960 GGTGGTTATGCAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTATTTGGTGTAG 28819019 Query 135696 TCTCTTACATGGGTCGCGAGTGG 135718 | ||||||||||| |||||| Sbjct 28819020 CTTACTACATGGGTCGTGAGTGG 28819042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627674621200000