Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq37374 607 2e-169 seq6 242 1e-59 seq5 111 5e-20 seq10 95.1 3e-15 seq456 82.4 2e-11 >seq37374 Length=151683 Score = 607 bits (672), Expect = 2e-169 Identities = 731/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || ||||| || || ||||| | || |||||||| || | Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||||||| ||| | |||| ||| || ||||| |||| |||||||| || || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCT 4193 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | || ||||||||| Sbjct 4192 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAAT 4133 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 || |||||||| || | |||| | || || ||||| |||| ||||||||||| Sbjct 4132 ATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATA 4073 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | || | ||||| |||||||||||||||||||| ||| |||| |||| Sbjct 4072 TGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 4013 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| ||| ||| | |||||||||| || | Sbjct 4012 CTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 3953 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| |||| Sbjct 3952 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCT 3893 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | || || |||| ||||| || ||| |||||||||||||| || || Sbjct 3892 GT-TTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAAT 3834 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||||||||||| || |||||| | ||||| || || || || ||||| ||||||||||| Sbjct 3833 TTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 3774 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 3773 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 3714 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 3713 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGG 3654 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | || || ||||| ||||| || ||||||||||| ||||| || || || ||||| Sbjct 3653 TTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 3594 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || |||||||| |||||| ||||||||||||||||||||||| || || Sbjct 3593 CCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 3534 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 | ||| || || || || || ||| ||||| | | || ||| |||||||||||||||| Sbjct 3533 TGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAA 3474 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | ||||||||||| || ||||| || ||||||||| ||||| || |||| | Sbjct 3473 CTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATAAATA 3415 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || |||||||||| || | ||||| ||||| || || |||| Sbjct 3414 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 3355 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCG 20276 ||||||| ||||| || ||| ||||| || Sbjct 3354 CTCATAATTTCCCTCTAGATCTAGCTGCG 3326 >seq6 Length=19356003 Score = 242 bits (268), Expect = 1e-59 Identities = 316/432 (73%), Gaps = 4/432 (1%) Strand=Plus/Plus Query 19844 TGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTC 19903 ||| ||||| |||||||| || || || ||| | ||||| | || ||||| ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 19904 CTCGATCATCAAGGAAACAACTGAGGATGTATC-GCAGAACTATGGCTATAAGTTCGGGC 19962 | || | |||||| || || ||| || ||| || | || || || || || | Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCA-AATGAAGGTTACAAATTTGGTC 3410891 Query 19963 AAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTC 20022 |||| ||||| || ||||||||||| ||||| || | || ||||| ||||||| || | Sbjct 3410892 AAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCC 3410951 Query 20023 AATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGG 20082 ||||||| |||||| |||||||||||||||| |||||| || ||| ||| || | | Sbjct 3410952 AATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 20083 TTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTA 20142 | || || ||| ||||| | | || ||| ||||||||| ||||||| | |||||||||| Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 20143 ACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTA 20201 | || ||||| || ||| ||||| ||||| || |||| || ||||||||| | Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAA-GGTCGTGTAATAAATACCTGGGCTGATATT 3411130 Query 20202 TTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCA 20261 | || |||||||||| || | ||||| ||| | || || ||||||||||| || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCT 3411190 Query 20262 CTTGATTTAGCT 20273 | ||||||||| Sbjct 3411191 TTAGATTTAGCT 3411202 >seq5 Length=30687117 Score = 111 bits (122), Expect = 5e-20 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 || || ||||| ||||| || |||||||||| |||| || || || ||||| ||||| Sbjct 28538752 TTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTTGGCCGATTG 28538811 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || |||||| | |||||||| || ||||| ||||||||||||||| ||| ||| Sbjct 28538812 ATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTAGCTGCTTGG 28538871 Query 20076 CCCGTGGTTGGCATATGGCTTACC 20099 || || || || || ||| ||||| Sbjct 28538872 CCTGTAGTAGGTATTTGGTTTACC 28538895 >seq10 Length=40424437 Score = 95.1 bits (104), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 10/207 (5%) Strand=Plus/Plus Query 19413 GTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATT 19472 |||||||| ||| | || | | || | |||| || || || | || ||||||||||| Sbjct 28818817 GTAGATATTGATAGTATTCATAAGTCTCTTTCTGGATCTCTACTTTATGGAAACAATATC 28818876 Query 19473 ATTTCTGGAGC-AGTAGTTCCAAGCTCCAATGCAA---TAGGACTGCACTTTTATCCGAT 19528 |||| ||| || | |||| | | | ||| || |||| |||| |||||||| | Sbjct 28818877 ATTTGTGGTGCAAATAGTCCTTA---CGTATGTAACTGTAGGTTTGCATTTTTATCCAAC 28818933 Query 19529 CTGGGAAGCCGGCACTTTAGATGA---GTGGTTATACAACGGCGGTCCATATCAACTTGT 19585 || |||||| | || | ||||| |||||||| |||||| ||||| ||| |||| | Sbjct 28818934 CTAGGAAGCAGCTTCTGTTGATGAATGGTGGTTATGCAACGGTGGTCCTTATGAACTAAT 28818993 Query 19586 TGTCTTCCACTTCTTAATAGGAGTAGC 19612 ||| | ||||||||| | || ||||| Sbjct 28818994 TGTTCTACACTTCTTATTTGGTGTAGC 28819020 >seq456 Length=558995 Score = 82.4 bits (90), Expect = 2e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 20001 TACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTC 20060 || ||||| ||||||| || |||||||| |||||| ||||||||||||||||||||| Sbjct 484669 TATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTC 484728 Query 20061 TTTCTTGCTACTTTCCCCGTGGTTGGCATATGG 20093 || || ||| ||| || || || || || ||| Sbjct 484729 TTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144377492755500