Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq37374 470 2e-127 seq6 187 4e-42 >seq37374 Length=151683 Score = 470 bits (520), Expect = 2e-127 Identities = 670/943 (71%), Gaps = 0/943 (0%) Strand=Plus/Minus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669 |||| |||||||||||| | ||||| || | | | ||||||| | ||||| Sbjct 4272 TTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTA 4213 Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729 | || || ||||| || ||||| || ||||| || || || ||||| || || |||| | Sbjct 4212 TCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGAT 4153 Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789 | | | ||||| ||||| ||||| |||||||| || |||| |||| || || | Sbjct 4152 CTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAG 4093 Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849 |||| || || ||||| || ||||||||||| || ||||||| ||| | ||||| || | Sbjct 4092 GTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCG 4033 Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909 ||||||| | | | | | |||||| | | || | | |||||||| | Sbjct 4032 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTG 3973 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969 ||||||||||| | ||| | ||||||||||||||||| |||||| |||||||| | Sbjct 3972 AGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 3913 Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029 |||| |||| ||| ||||| ||| | | || || | ||||| || || || | Sbjct 3912 CTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGG 3853 Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089 | ||||||||| |||| || || || || ||||| || ||| | ||||| || || || | Sbjct 3852 ATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGC 3793 Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149 |||| || |||||||| ||||| || ||| |||||| || ||| | ||||| || | Sbjct 3792 ATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCC 3733 Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| ||||| | || || ||| | ||| | |||||||| | Sbjct 3732 TATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 3673 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| || || ||||| ||||| || ||||| || || | Sbjct 3672 ATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAG 3613 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 |||| ||||| || || || || | |||||||| |||||| |||||||| | Sbjct 3612 CTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTT 3553 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 |||||| |||||||| || | |||||||| | || | ||||| ||| || | |||| Sbjct 3552 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTA 3493 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 || |||| ||||| |||||| ||||||| || || ||||||||||| || |||||| Sbjct 3492 TCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTC 3433 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| || | ||| |||| |||| || ||||| |||| |||||||||||||||| Sbjct 3432 AAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAG 3373 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 | ||||| ||| | ||||| || || ||||| || || |||| Sbjct 3372 TAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 3330 >seq6 Length=19356003 Score = 187 bits (206), Expect = 4e-42 Identities = 237/326 (73%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286 |||||||| || || ||||||||||| || ||||| || || ||||| |||| || || Sbjct 3410876 GGTTACAAATTTGGTCAAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTT 3410935 Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346 || || | |||||||| |||||| |||||||| | ||||| |||||||| Sbjct 3410936 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTA 3410995 Query 212347 GCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 212406 || | |||||| | | || | ||||| ||| || | |||||| |||| |||| ||| Sbjct 3410996 GCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTC 3411055 Query 212407 AACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCT 212466 ||| ||||||| || || ||||||||||| || ||||| |||| || | | Sbjct 3411056 AACTTAAATGGTTTTAATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAAT 3411115 Query 212467 ACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAAT 212526 || |||| |||| || ||||| |||| ||||||||||||||||| ||| | ||| | ||| Sbjct 3411116 ACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAAT 3411175 Query 212527 GCACACAACTTCCCACTTGACTTAGC 212552 || || || || || | || ||||| Sbjct 3411176 GCTCATAATTTGCCTTTAGATTTAGC 3411201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807177920305000