Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq37374 506 2e-138 seq6 215 6e-51 seq9 111 2e-19 >seq37374 Length=151683 Score = 506 bits (560), Expect = 2e-138 Identities = 702/983 (71%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725 || ||| | ||| |||| ||| || ||||| | ||| |||| ||||||||||| || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 170726 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 170785 ||||| || | | | ||||| || || || ||| | || || |||||||| ||| Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCT 4193 Query 170786 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 170845 ||||| ||||| || || || | || || ||| | || ||| | | ||||| ||||| Sbjct 4192 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAAT 4133 Query 170846 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 170905 ||||| |||||||| | |||| |||| || ||||| || || || ||||| || Sbjct 4132 ATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATA 4073 Query 170906 TGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATT 170965 ||||||||||| || | || || ||||| |||||||| |||||||| | || || || Sbjct 4072 TGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 4013 Query 170966 TTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGA 171025 | |||||| | |||| | || |||||||||| | |||||||||| | | Sbjct 4012 CTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 3953 Query 171026 CTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCA 171085 || || ||| | |||||||| ||| ||||| ||||| ||||| | || || ||| Sbjct 3952 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCT 3893 Query 171086 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 171145 || ||| | | ||||| | ||||| || || || ||||||||||| ||||| || Sbjct 3892 GTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATT 3833 Query 171146 TCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCC 171205 || ||||| ||||| || ||| | || || || || || || || || || ||||| || Sbjct 3832 TCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCA 3773 Query 171206 TTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGT 171265 || || ||| ||||||||| ||| | ||||| || || |||||||| ||||| ||| Sbjct 3772 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 3713 Query 171266 TCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGC 171325 || | || || ||| | | ||||| || || || || || || || | || Sbjct 3712 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGT 3653 Query 171326 TATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGT 171385 || | || || ||||| |||||||| ||||| ||||| ||||||||||| || || || Sbjct 3652 TACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGC 3593 Query 171386 AGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCT 171445 |||| |||||||| |||||| |||||||| |||||||| ||||| |||||||| ||| Sbjct 3592 CGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCT 3533 Query 171446 GTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 171505 | | |||||||| || | ||||| ||| || | |||||| | || ||||| |||||| Sbjct 3532 GCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAAC 3473 Query 171506 CTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACA 171565 | || || || || ||||||||||| || || ||| | || | || || Sbjct 3472 TTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACC 3413 Query 171566 TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCA 171625 |||| ||| || ||||| |||| |||||||| |||||||| ||||||||| | ||||| Sbjct 3412 TGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCT 3353 Query 171626 CACAACTTCCCACTAGACCTAGC 171648 || || ||||| ||||| ||||| Sbjct 3352 CATAATTTCCCTCTAGATCTAGC 3330 Score = 394 bits (436), Expect = 1e-104 Identities = 710/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| ||||| ||| || |||||||| || | || ||||| ||| Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || ||||| || ||||| || || | || | || |||||||| ||| || || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || || || | ||| || ||| | || || ||||| ||| Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTA 30982 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || ||||| || || || | | || | | | || | | ||||| || ||||| Sbjct 30981 ACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGT 30922 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| ||||| |||||| || || |||| ||| |||||||| || |||| ||||| Sbjct 30921 CCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTT 30862 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | || || | || ||| | |||||||||||| | | || ||||| |||| || Sbjct 30861 GCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 30802 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| | |||||||||| ||||| || || Sbjct 30801 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGTT 30742 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | ||||| || |||||| | |||||| | |||||||||| || ||| |||||| Sbjct 30741 TCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGT 30682 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || ||||| || ||||| | || | || | || || || || ||| || | || Sbjct 30681 GTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAAC 30622 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 ||||||||||||||||| || || ||| || | || | ||| ||||||| || || ||| Sbjct 30621 CCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCAT 30562 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 |||||||| ||| | || || || | |||||| || | | | | Sbjct 30561 GGTGCAACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 30519 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| |||| ||| | || || | || || || | |||||||||||| ||| || Sbjct 30518 CAA-ATACA---TTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTT 30463 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 |||||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 30462 ACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 30403 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 30402 CATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTC 30343 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 ||| | || || ||| | | || || ||||| || |||||||| || | ||||| ||| Sbjct 30342 GGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAA 30283 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || ||||| | || |||||||| | || Sbjct 30282 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 30223 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| || || ||||| || ||||| ||| || | ||||| || || || | ||| Sbjct 30222 TGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 30163 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 30162 CGTGGAAACGCTCTTTAA 30145 >seq6 Length=19356003 Score = 215 bits (238), Expect = 6e-51 Identities = 305/429 (71%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 171220 TGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATC 171279 |||||| ||| | ||||| || || |||||| | ||| | ||||| | || || || Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 171280 TTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACA 171339 | | | || || || || || || || || | ||| | || || || || || || Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 171340 AGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCA 171399 |||||||||||| ||||| ||||| |||||||||| || || || |||| |||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 171400 GTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGT 171459 |||||| |||||||| |||||||| |||| |||||||| |||| | ||| |||| Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 171460 CTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAA 171519 || | ||||| ||| || | |||||| | || |||| |||||| | || || || || Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 171520 CTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACATGGGGAGATGTTCT 171579 ||||||||||| || | ||| | || | || || |||| ||| || | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 171580 TAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACT 171639 |||| |||| |||||||| |||||||| ||| ||||| | ||||| || || || || | Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTT 3411192 Query 171640 AGACCTAGC 171648 ||| |||| Sbjct 3411193 AGATTTAGC 3411201 >seq9 Length=31747250 Score = 111 bits (122), Expect = 2e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 172238 AGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGCAATCTTTCGTTATAT 172297 ||||||| | |||||||||| || ||| |||||||| ||||| || ||||| | || Sbjct 26587603 AGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCAT 26587544 Query 172298 TTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTTCATATGATGGGTGTAGC 172357 | || | || || || || ||| || | || ||||||||||||||||| || || Sbjct 26587543 CCTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGC 26587484 Query 172358 AGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCAACAGTACAGAACACATT 172417 ||| || | || | ||| ||||||| || || ||||||||||| ||| | || || || Sbjct 26587483 TGGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTT 26587424 Query 172418 GTATGAAGA 172426 | |||||| Sbjct 26587423 ATTTGAAGA 26587415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570002377545000