Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 seq1 98.7 1e-15 >seq3 Length=41204908 Score = 161 bits (178), Expect = 1e-34 Identities = 391/582 (67%), Gaps = 14/582 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||||| || ||||||||||| | || ||||||||||| || |||||| Sbjct 26200340 CAAGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGT 26200399 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG-ATCCAGAAAAGAA 33422 || ||||| ||||| || || || ||||| || |||| ||| || | ||| || ||||| Sbjct 26200400 CCTGGCATGAGGCCCCGTTTCTTGAGCCAGAAGATGG-AGCAAAAGCTTCCGGAGAAGAA 26200458 Query 33423 GATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGCTGTCAT 33478 ||| || || || ||| |||||||| | || | ||| | | || ||| | ||| Sbjct 26200459 GATACCCTCGAC-GCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGTC-- 26200515 Query 33479 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| | ||||| | ||||||||| | || || || || || || ||||| | Sbjct 26200516 -GATCCAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGT 26200574 Query 33539 TAAAGAGATAGtttttttCATTAC--TATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 ||||||| | |||| || ||| ||||| | || || |||| | || || || Sbjct 26200575 GAAAGAGACGGGTTTTCTC--TACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTA 26200632 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 ||| || || |||||||| || || || ||||| || ||||| || | |||||||| Sbjct 26200633 CATCTCGGAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCGGA 26200692 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 | ||| || || | ||| || | || | ||||| || || ||||| ||| Sbjct 26200693 GACCTGGACCTCCTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGAGGC 26200752 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 || || || || | ||||| | | |||| ||| | || || | ||||| Sbjct 26200753 GGCGAAGAAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGAGTGTTCCA 26200812 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 | | |||| || | || | || || || ||| | ||||| || || || ||||| || Sbjct 26200813 GTGACTGATGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTT 26200872 Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878 || ||||| | |||||| | |||||||| ||||| || Sbjct 26200873 CTTGTACATTTCCCAGATTTGGGGGTATTGGATAGGGAACAT 26200914 Score = 138 bits (152), Expect = 1e-27 Identities = 244/353 (69%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| |||||||| || || || |||| || ||||||||||| || ||||| Sbjct 34261340 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGA 34261281 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| | ||||||||| || ||||||||||| || ||| || || |||||| Sbjct 34261280 CCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAG 34261221 Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33482 ||||| || || ||| || ||||| | || | ||| | | | || || ||| || Sbjct 34261220 ATTCCCTCAAC-GCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGGTGGCATCGAT 34261162 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| ||||| | ||||||||| ||||| || || || || | ||| || Sbjct 34261161 CCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAA 34261102 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 || | || ||||| | ||||| | || || || | | ||||| ||||| || Sbjct 34261101 CAGGTGATTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTC 34261042 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33655 || || ||||| || ||||| ||||| || ||||||||| | |||||||| Sbjct 34261041 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGAGCCTCGG 34260989 >seq1 Length=42234885 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421 || |||| ||| || ||||| | ||| | ||| || | ||| | || | || |||||| Sbjct 1930113 CCTTTTGCCTCCCCCTTGATCCACGTAACGAGCAGTATCATTGAACACACGCAGCATTGG 1930054 Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT 63481 || |||||| |||||| | ||||| || || ||| || || || ||||||||||||| Sbjct 1930053 AACAATACCATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATT 1929994 Query 63482 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541 || || | ||| ||||| || || ||| || | || || || || || Sbjct 1929993 GTGAACAGAAACACCAATTCCACCGGCTGATTTGCTAATGATAGCACACTCCTTCAAAGT 1929934 Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATG 63575 |||||| || |||||||| |||||||| ||||| Sbjct 1929933 GTCATATATTCCCTCTATACTATCATCTTTCATG 1929900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622656166855000