Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 seq4 109 1e-18 seq25 102 2e-16 >seq1 Length=42234885 Score = 114 bits (126), Expect = 3e-20 Identities = 170/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| || ||||| || | |||||| | ||| | Sbjct 1929885 TTGCTTCCTTGTGTGCATGAAAGATGATAGTATAGAGGGAATATATGACACTTTGAAGGA 1929944 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG- 363724 |||||| | ||| ||| || || ||||||||||| || | |||||| |||||| Sbjct 1929945 GTGTGCTATCATTAGCAAATCAGCCGGTGGAATTGGTGTTTCTGTTCACAATATTCGTGC 1930004 Query 363725 CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 ||||| ||||||||| || ||||| | |||| | || ||||| | ||||| ||||| Sbjct 1930005 CACAG-GCAGTTACATCCGTGGCACAAATGGGACA-TCAAATGGTATTGTTCCAATGCTG 1930062 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||||||| | ||||||| | ||||| || || || ||||| || | ||||| Sbjct 1930063 CGTGTGTTCAATGATACTGCTCGTTACGTGGATCAAGGGGGAGGCAAAAGGAAAGG 1930118 >seq4 Length=34671004 Score = 109 bits (120), Expect = 1e-18 Identities = 100/124 (81%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 111702 CAGTTTTATGTA-CACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760 |||||||||||| ||| | ||| | | ||||| ||||||||||||||||||||||| || Sbjct 34097114 CAGTTTTATGTAGCAC-ATGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACAT 34097172 Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 || || || ||||| |||||||||||| ||| || ||||| || ||| | || ||||| Sbjct 34097173 GGGCCTGGGCGTTCCATTTAATATTGCATCTTATGCCCTACTGACATGCATGATTGCTCA 34097232 Query 111821 TTTT 111824 | || Sbjct 34097233 TGTT 34097236 >seq25 Length=312266 Score = 102 bits (112), Expect = 2e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| ||| ||||| || | ||| || | ||| | Sbjct 242066 TTGCTTCCTTGTGTGCATGAATGATGATAGCATAGAGGGGATATATGAAACTTTGAAGGA 242125 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| ||||| ||| || || ||||||||||| || ||||||| ||||||| Sbjct 242126 GTGTGCTATTATTAGCAAATCAGCTGGAGGAATTGGTGTCTCTGTCCACAACATTCGTGC 242185 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | |||||| ||||| || ||| || || || || | ||||| ||| | | Sbjct 242186 TACCG-GCAGTTATATTCGTGGGACAAATGGGACGTCCAACGGCATTGTTCCAATGTTAC 242244 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||||||| | ||||||| | || || || ||||| ||||| ||| | ||||| Sbjct 242245 GTGTGTTCAATGATACTGCCCGCTATGTTGATCAGGGGGGAGGCAAGAGGAAAGG 242299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302729466727250