Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=42234885 Score = 102 bits (112), Expect = 7e-17 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 ||||||||||||||||| || | || ||||| ||||| ||| | ||| |||| | || Sbjct 37712651 ATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATAACCTTGGAAGTGGAGAGTTCA 37712592 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | ||| | ||||| || ||| ||| ||| ||||| || || ||||| ||| Sbjct 37712591 GATACAATT---GACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGAT 37712535 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || ||||| | ||| || ||||| | ||||| | | ||| | || |||||| Sbjct 37712534 CAGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGACGGAAGGACCCTTGCGGATTAT 37712475 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||||| || || || || ||| | || |||| ||||| Sbjct 37712474 AACATACAGAAGGAATCCACTCTGCACTTGGTTTTGAG 37712437 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| |||||||| || ||||| ||||| ||||| ||| | || || | Sbjct 6126212 AATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTCGAAAGCTC 6126153 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| | | |||| || || || ||| || || || || |||| || | Sbjct 6126152 TGACACTATAG-ACAATGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACC 6126094 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || || | ||| || || ||| ||||||||| | |||| |||| ||||||| Sbjct 6126093 AGCAGAGGCTCATATTTGCCGGAAAGCAACTAGAAGATGGCCGAACCTTGGCAGATTATA 6126034 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||| ||||| || ||| | ||| | || ||| || | || || || Sbjct 6126033 ACATTCAGAAAGAATCAACTCTCCATCTTGTCTTGCGACTCCGTGGTGG 6125985 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| || || | || || |||||||| || | || || | Sbjct 37702757 AATGCAGATTTTTGTGAAGACTTTAACTGGGAAAACCATAACTTTGGAGGTTGAAAGCTC 37702698 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| ||||| ||| ||| || || |||||| |||| || | Sbjct 37702697 TGACACTATTG-ACAATGTAAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCGGACC 37702639 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| |||||||| | ||| || || || || ||||||| ||| | || ||||||| Sbjct 37702638 AGCAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGGCGTACCCTTGCAGATTATA 37702579 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| || ||||| || ||| | || |||||||||| | || || |||| Sbjct 37702578 ACATCCAGAAAGAATCCACTCTGCACTTGGTGTTGAGGCTTCGTGGTGGAA 37702528 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGA-AACG-GAGTCCA 115343 |||||||| |||||||| || | || || |||||||||||| | || || |||| || Sbjct 37707402 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCCTTGAGGTCGAGAGTTCA 37707343 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| ||| | ||||| || || || ||||| ||| |||| || | Sbjct 37707342 --GACACCATTGATAATGTAAAGGCCAAGATCCAAGACAAAGAGGGCATCCCTCCAGACC 37707285 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| || || |||||| | || |||| | |||| | || ||||| | Sbjct 37707284 AGCAGAGGCTGATTTTCGCTGGGAAACAACTCGAGGATGGAAGAACCCTTGCTGATTACA 37707225 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| || ||||| || | ||| ||||| | | ||| |||| || Sbjct 37707224 ATATTCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGTTTGAGAGGCGG 37707176 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || || || || |||||||||||| | || ||| | Sbjct 37712423 ATGCAGATTTTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAAAGCTCT 37712364 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || ||| ||| || || || ||| |||| |||||| Sbjct 37712363 GATACAATTGATAATGTGAAGACAAAGATTCAGGACAAGGAGGGCATCCCACCAGATCAG 37712304 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||||| ||| || || ||||| ||||||| ||| |||| || || ||| Sbjct 37712303 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACAAC 37712244 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||| ||||| || || Sbjct 37712243 ATTCAGAAAGAATCCAC 37712227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425150252485000