Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5 125 7e-24 seq1 120 3e-22 seq2 116 3e-21 seq109 104 2e-17 seq3 84.2 2e-11 >seq5 Length=30687117 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || ||||||||||| |||||||| ||| Sbjct 9179534 CCACCGCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCG 9179475 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 9179474 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9179415 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | ||||| | Sbjct 9179414 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAAGACTCCACC 9179355 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| ||||| |||||||| Sbjct 9179354 TCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAATATCTGCAT 9179308 >seq1 Length=42234885 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| ||||||||||||||||||||||| Sbjct 6126213 CCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCA 6126272 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||| ||||| || | || | ||| ||||||||||| ||| Sbjct 6126273 AGGGTACGACCATCCTCAAGCTGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGG 6126332 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | || || | | || | ||||| | | ||| | Sbjct 6126333 ATTCCTTCCTTGTC-TTGAATCTTGGCTTTCACATTATCAATGGTATCTGAGCTCTCTAC 6126391 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| |||||||| ||||| || ||||| || ||||| Sbjct 6126392 TTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTAACGAAGATTTGCAT 6126439 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | |||||| || || || || | || || |||||||||||||||||||| Sbjct 37703213 GCCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 37703272 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | |||||| || || || || ||| | || | | |||||| |||||||| Sbjct 37703273 AAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGG 37703332 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||||||||| ||| || ||| | | || | ||||||| ||| || | Sbjct 37703333 GATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCAC 37703392 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||||| ||||| | |||||| ||||| || ||||| Sbjct 37703393 CTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | |||||| ||||| || || | ||| |||||||| ||||| |||||||| Sbjct 37712653 CCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGCA 37712712 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| || || || || ||| | || | | |||||| || |||||| Sbjct 37712713 AGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGGG 37712772 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| |||||||| ||| || ||||| | || | ||||| | ||| | Sbjct 37712773 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACC 37712832 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || | ||| ||||| ||||||||||| Sbjct 37712833 TCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | || ||||| | || | || || |||||||| ||||||||||| | Sbjct 37707403 GCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATC-CG 37707461 Query 131067 CATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || | ||||| ||||| || ||||| || || |||| | | ||||||||| || | Sbjct 37707462 CAAGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTG 37707521 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 |||| || || ||||| ||| | | ||| || | | || | || |||| ||| || Sbjct 37707522 GGATACCCTCCTTGTC-TTGAATCTTTGCTTTCACGTTATCAATGGTGTCGGAGGATTCA 37707580 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | ||| | |||||| ||||| | |||||| ||||| |||||||| Sbjct 37707581 ACCTCAAGGGTGATGGTTTTGCCGGTCAAAGTTTTCACGAATATCTGCAT 37707630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || || ||||| || || | ||| |||||||| ||||| ||||||||| Sbjct 37712881 CCACCCCTTAACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCA 37712940 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | | ||||| ||||| || || || | || | | ||||| ||||||||| Sbjct 37712941 AGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGGG 37713000 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||||| | || | || || | || || | Sbjct 37713001 ATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACT 37713060 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | |||||| || || |||||||| Sbjct 37713061 TCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 >seq2 Length=35625406 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || |||| || | ||| || ||||| || |||||||| ||| Sbjct 31176735 GCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31176794 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||| || || ||| |||| || | |||||||||||| || Sbjct 31176795 GAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 31176854 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| || ||||| | || | || || | | ||| | Sbjct 31176855 AATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAAC 31176914 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| || || || || || ||||||||| Sbjct 31176915 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCATG 31176963 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || | || | ||| || ||||| || |||||||| ||| Sbjct 31176507 GCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31176566 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||| || || ||| |||| || | |||||||||||| || Sbjct 31176567 GAGGGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 31176626 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| || ||| | | || | || || | | ||| | Sbjct 31176627 AATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAAC 31176686 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 31176687 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATG 31176735 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || |||| || | ||| || ||||| || |||||||| ||| Sbjct 31176963 GCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31177022 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||| || || ||| |||| || | |||||||||||| || Sbjct 31177023 GAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGG 31177082 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| || ||| | | || | || || | | ||| | Sbjct 31177083 AATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCAC 31177142 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 31177143 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATG 31177191 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| || || | |||||| || | || | ||| || ||||| |||||||||||||| Sbjct 31176278 AGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAG 31176337 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| | ||||| ||||| || || ||| |||| || | |||||||||||| | Sbjct 31176338 CAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGG 31176397 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | ||||| || ||||| ||| || ||||| | || | || || | | ||| | Sbjct 31176398 GAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAA 31176457 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 31176458 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATG 31176507 >seq109 Length=622178 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||| || |||||||| || | Sbjct 289697 CCTCCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 289756 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| |||| |||||||||||||| || ||| Sbjct 289757 AGGGTGCGACCATCCTCCAGTTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 289816 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| ||| | | || | || |||| ||| | Sbjct 289817 ATCCCTTCCTTGTCCTGAATTTTGGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCACC 289876 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| ||||| || | || || ||||| || ||||| Sbjct 289877 TCGAGAGTTATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 289923 >seq3 Length=41204908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/227 (68%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||||| |||||| || ||||||| | |||||| || | ||| | Sbjct 26200560 ATTCCCTGCGTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGACTCCT---CCGAG 26200504 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 | ||||||||||| | || |||||||| || ||||| |||| || || || || Sbjct 26200503 TCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGC 26200444 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 ||| | ||||||| | |||| | |||| ||||||| || || || || |||| Sbjct 26200443 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAAC 26200384 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 || || || || ||||||||||| || ||| ||||| || || || Sbjct 26200383 GAACTCATCTCCCGCGACGAGGGTCTCCATTGCGACTTCGCTTGCCT 26200337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471792281520000