Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 seq109 95.1 1e-14 seq2 89.7 4e-13 seq5 87.8 1e-12 >seq1 Length=42234885 Score = 105 bits (116), Expect = 5e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || ||||||||||| |||| ||| | || ||||||||| Sbjct 37706516 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGT 37706575 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || ||| ||||||||| ||| || || || | |||||| ||||| || ||| Sbjct 37706576 TTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTT 37706635 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| ||||| | | | || || | |||| |||| ||| ||||| ||||| | Sbjct 37706636 GCT--TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTG 37706693 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || || ||||| ||||||||| Sbjct 37706694 TCAGAGTCTTCACAAATATCTGCATT 37706719 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| || || ||||| || || |||||||| |||| ||| | ||| Sbjct 37702317 AGGACAAGATGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTACGACCATCC 37702376 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| || || ||| ||||||||| ||| || || || | ||||| ||||| Sbjct 37702377 TCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCC 37702436 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| |||||| | | | || || | |||| |||| ||| |||| Sbjct 37702437 TGAATCTTTGC--CTTCACATTATCGATTGTATCAGAGCTCTCCACCTCCAAGGTAATGG 37702494 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || ||||| || || ||||| ||||||||| Sbjct 37702495 TTTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 37702529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||| |||||||| |||||||| || || | |||| | ||||| Sbjct 37703229 AGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCC 37703288 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | |||||| || || |||| |||| ||| || ||| ||| | || |||||||| Sbjct 37703289 TCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCC 37703348 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | || ||| || ||| || | ||||| | Sbjct 37703349 TGGATCTTAGC--CTTCACATTATCAATGGTATCGGAGGATTCCACCTCGAGTGTGATAG 37703406 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||||||| ||||| || || || ||||| Sbjct 37703407 TTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||||| |||| ||||| ||||| ||||| |||||||| || || || Sbjct 37712425 CCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGTATGTTATAATCCGCA 37712484 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| || | ||||| || ||| | ||||||| ||| || || || Sbjct 37712485 AGGGTCCTTCCGTCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGG 37712544 Query 16829 ACGCCCTCTTTGTCGGCAAT--TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || ||| ||||| ||||| | | | | || || |||| Sbjct 37712545 ATACCCTCCTTATCCTGAATCTTTGCT--TTCACATTGTCAATTGTATCTGAACTCTCCA 37712602 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||| ||||| ||||| |||| || ||||||||||| ||||| Sbjct 37712603 CTTCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCAT 37712651 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||||||||| || || ||||| || || | |||| | | ||| Sbjct 37707191 AGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCAAGGGTTCTTCCATCC 37707250 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | |||||| || || |||| |||| ||| ||||| ||| | |||||||||||| Sbjct 37707251 TCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGGATGCCCTCTTTGTCT 37707310 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | ||||| ||| || | ||| |||| Sbjct 37707311 TGGATCTTGGC--CTTTACATTATCAATGGTGTCTGAACTCTCGACCTCAAGGGTAATGG 37707368 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||| || |||||||| || ||||| Sbjct 37707369 TTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| || || || ||||||||||| |||| ||| | || |||||||| Sbjct 37712221 TGAAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGC 37712280 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| ||||||||| ||| || || || | |||||| ||||| ||| | Sbjct 37712281 TTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTT 37712340 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | || || | ||| |||| ||| |||||||| || ||| Sbjct 37712341 GTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCTGTC 37712400 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || |||||||||||||| Sbjct 37712401 AGAGTCTTCACAAAAATCTGCAT 37712423 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| |||||||| || || | || | ||||| | ||| Sbjct 37707428 TGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCGAGTTGC 37707487 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT--TT 16850 || |||||| | ||||| | ||| ||||| || | ||||| ||||| ||| || Sbjct 37707488 TTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTT 37707547 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| ||||| | | | |||||| || || || | |||||||||||| |||| Sbjct 37707548 GCT--TTCACGTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTTTTGCCGG 37707605 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| ||||| || || |||||||| Sbjct 37707606 TCAAAGTTTTCACGAATATCTGCAT 37707630 >seq109 Length=622178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || ||||||||||| || || |||||||| || Sbjct 289241 CCACCACGAAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCA 289300 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||||||| || || || | || |||| ||| |||||| || Sbjct 289301 AGGGTCCTCCCATCTTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGCTGGTCCGGTGGA 289360 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||||| | |||||| | | | | |||||| ||| Sbjct 289361 ATTCCCTCCTTGTCCTGAATTTTCGCCTTCACATTGTCAATAGTGTCAGAACTCTCAACC 289420 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || |||| || || |||||||||||||| Sbjct 289421 TCCAGAGTGATTGTCTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 289467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | | ||||| | || Sbjct 289493 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGC 289552 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| |||| | || ||| ||||| || | |||||| ||||| ||| | Sbjct 289553 TTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTA 289612 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | || || | |||| || | |||||| || |||||||| Sbjct 289613 GCCTTCACGTTGTCGATGGTATCTGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCGGTA 289672 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || ||||||||| Sbjct 289673 AGGGTCTTGACGAATATCTGCATT 289696 >seq2 Length=35625406 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || ||||| || |||||||||||||| | ||| | | ||||||| ||| Sbjct 31176532 TGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGT 31176591 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || | || ||| |||||| || | ||||| ||||| || || Sbjct 31176592 TTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTA 31176651 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | ||| || | ||||||||| ||||||| Sbjct 31176652 GC--CTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGG 31176709 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 31176710 TGAGAGTCTTGACAAAGATCTGCAT 31176734 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || ||||| || |||||||||||||| | ||| | | ||||| | ||| Sbjct 31176988 TGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGT 31177047 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || | || ||| |||||| || | ||||| ||||| || || Sbjct 31177048 TTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTA 31177107 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | |||| || | ||||||||| ||||||| Sbjct 31177108 GC--CTTTACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGG 31177165 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 31177166 TGAGAGTCTTGACAAAGATCTGCAT 31177190 >seq5 Length=30687117 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| |||||||||||||| | ||| | ||||||| | || Sbjct 9179510 TGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 9179451 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| |||||| || | |||||| || || || || Sbjct 9179450 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTG 9179391 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | ||||| | |||| || | ||||||||| || || | Sbjct 9179390 GC--CTTGACATTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCG 9179333 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || ||||| || || ||||||||| Sbjct 9179332 TAAGGGTTTTCACGAATATCTGCATT 9179307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404903479251250