Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq37374 580 1e-160 seq6 259 5e-64 seq9 214 2e-50 seq5 102 9e-17 >seq37374 Length=151683 Score = 580 bits (642), Expect = 1e-160 Identities = 725/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| ||| | || |||||||| |||| |||||||| | Sbjct 4313 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4254 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 ||||||||| ||| | ||| | ||||| ||||| || || ||||||| | || || | Sbjct 4253 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4195 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || |||||||| || | || |||||| | ||||| |||| Sbjct 4194 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4135 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | ||||| |||||||| || | || | || || || ||| | || || ||||| | Sbjct 4134 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4075 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | ||||||||||| || ||||||||||| | || ||||| ||||||| | || | | Sbjct 4074 TATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 4015 Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411 | | |||||| | | || | | ||||||||||||||| |||||| | || | Sbjct 4014 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 3955 Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471 | || |||||||||||||||||| || ||||| || || ||||||||||| || | | Sbjct 3954 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 3895 Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531 | || ||| || |||||||| | |||||||| || || || | ||||| || || | Sbjct 3894 CTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 3835 Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591 | ||| || ||||| | ||| |||| || || || ||||| || || || ||||| | Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651 | || || ||| | |||||||| ||||||||||| || || || ||| || ||||| | Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710 | | || ||||| | | | | || | || ||||| |||| ||| || || | Sbjct 3714 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAA 3656 Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| ||||||||||| ||||| || || || || || |||||||||||||| || Sbjct 3655 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTT 3596 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || ||||||||||||| || |||||||| ||||| || | || |||||||| Sbjct 3595 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTA 3536 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890 || || |||||||| || ||||| |||||||| ||| | ||| | ||||| ||||| ||| Sbjct 3535 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 3476 Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950 ||| | || ||||| || |||||||| ||| | | ||| |||| |||||||| | || Sbjct 3475 AACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAAT 3416 Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010 || ||||| ||| | | ||||| ||| || ||||||||||||||||| || |||||| Sbjct 3415 ACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAAT 3356 Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTGC 167039 ||||| || |||||||| ||||| ||||| Sbjct 3355 GCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 542 bits (600), Expect = 3e-149 Identities = 730/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || |||||||| ||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| || ||| | || | || || ||| |||| || ||||| ||| Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACCTTGAGGG-TGCTAATTTTCT 167478 || || |||||||| ||||| ||||| | ||| | || || ||| | || | | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCT-T 30983 Query 167479 CACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 167538 || || ||||| || ||||| ||| | | | | || ||| | | |||| ||||| Sbjct 30982 AACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGG 30923 Query 167539 TCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTTTGT 167598 |||||| | ||||| ||||| | | | ||||| ||| | || || || ||| ||||||| Sbjct 30922 TCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGT 30863 Query 167599 GGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAGTAG 167658 || |||||||| || || | | ||||| || ||| | || |||||||| | | | Sbjct 30862 TGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 30803 Query 167659 ACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGT 167718 | || | || ||||| ||||| || || || || ||||| |||||||| ||||| Sbjct 30802 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGT 30743 Query 167719 GTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGG 167778 ||||| ||||| || ||||| || || ||||| ||||||||||||| || ||||| Sbjct 30742 TTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGG 30683 Query 167779 TGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAA 167838 ||| ||||| |||||| ||||| | || || | || || || ||||| ||||| | || Sbjct 30682 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAA 30623 Query 167839 CCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCA 167898 ||| || ||||||||||||||||||||| | | |||| |||| | || | || || || Sbjct 30622 CCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCA 30563 Query 167899 TGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGC 167958 ||||| || ||||| |||||| | | |||||||||||| ||||| || ||| || Sbjct 30562 TGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 30503 Query 167959 ATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTC 168018 ||| | | || || | || ||||||||||| ||||| |||||||| || || ||||| Sbjct 30502 TTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTC 30443 Query 168019 TCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGT 168078 ||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || || Sbjct 30442 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30383 Query 168079 TCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCG 168138 || || | || | |||| ||| || |||| | ||||| | || || || | || Sbjct 30382 ACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACG 30323 Query 168139 TGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTT 168198 |||||||||||| || ||||| ||| | | ||||| || ||||| || ||||| ||||| Sbjct 30322 TGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 30263 Query 168199 CTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCA 168258 ||| || ||||| || ||| | || ||||| | ||||| |||||||| | ||| || Sbjct 30262 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCA 30203 Query 168259 ACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || ||||||||| || ||||||| || || || | ||| | || |||||||| Sbjct 30202 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 >seq6 Length=19356003 Score = 259 bits (286), Expect = 5e-64 Identities = 318/432 (74%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 166608 TGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTC 166667 |||||| ||||||||||| || || || ||| | ||| | || | || ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 166668 CTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTC 166726 | | | | | | || ||||| |||| ||| | | ||| | |||||||| ||||||| Sbjct 3410833 -TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTC 3410891 Query 166727 AAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCC 166786 |||||||||| || || || || || |||||||||| || || || || ||||||||| Sbjct 3410892 AAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCC 3410951 Query 166787 AATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTG 166846 |||| || |||||||| ||||| || | | |||||||| || || |||||| | | Sbjct 3410952 AATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 166847 TCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCA 166906 | ||||| |||||||| ||| | ||| | ||||| |||| |||||| | || ||||| | Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 166907 ACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCC 166966 | |||||||| ||| | || ||| |||| |||||||| | || || ||||| ||| | Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTA 3411131 Query 166967 TCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTC 167026 | ||||| ||| || ||||||||||||||| | || ||||||||||| || || ||| Sbjct 3411132 TTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTT 3411191 Query 167027 TGGATCTTGCTG 167038 | ||| | |||| Sbjct 3411192 TAGATTTAGCTG 3411203 >seq9 Length=31747250 Score = 214 bits (236), Expect = 2e-50 Identities = 235/313 (75%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 167744 GGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTA 167803 || ||||| ||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 167804 CTATTCCTACAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCT 167863 || || | || || || ||||| ||||| | ||||| || |||||||||||||||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 167864 GGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTG 167923 ||| | | |||| |||| | || | || || ||||||| || ||||| |||||| | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 167924 TATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAA 167983 | |||||||||||| ||||| || ||| || ||| | | || || | || || Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 167984 ACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGC 168043 |||||||| ||||| |||||||| || || ||||| ||||| ||||| ||||||| | Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 168044 AATAAGCGTTGGT 168056 ||||| ||||||| Sbjct 26587302 AATAAACGTTGGT 26587290 >seq5 Length=30687117 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| ||||||||||| ||||| || || || || | ||||||||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || ||||||||||||| | ||||| | | ||| | | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCT 166866 || || |||||||| || ||||| |||||||| ||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCT 28538898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566966996300000