Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-29 seq5 105 1e-17 seq11 91.5 3e-13 seq10 91.5 3e-13 seq6 91.5 3e-13 seq152 89.7 1e-12 seq9 87.8 4e-12 seq7 87.8 4e-12 seq4 87.8 4e-12 seq2 87.8 4e-12 seq1 87.8 4e-12 >seq3 Length=41204908 Score = 145 bits (160), Expect = 2e-29 Identities = 300/438 (68%), Gaps = 10/438 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTT-TGT 251621 |||||||| || | ||| |||| ||| || || |||||||| | ||||| ||||| ||| Sbjct 26200073 TCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATCAGCTCCATCCAATCGAATGGGTTCTGT 26200132 Query 251622 GGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAG 251681 |||||||| ||| ||||| || ||| | | || || |||||||| | Sbjct 26200133 A-CATTGTACACCTTCCCGCACCCAAGGGCACCGAGCAACCTATCAGCAACAAACTCAAT 26200191 Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACG-ACAAGGAATTGCCTCACAGA 251740 ||||| | ||||| | |||||| || | || ||| |||||||| || || |||| Sbjct 26200192 GTACTGACTCATCAAGGCCCCGTTCATCCCCACCA-ACGCACAAGGAAGCGCGTCGCAGA 26200250 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACA 251800 ||| ||| | ||| || | || || || |||||| || |||| | || | | Sbjct 26200251 CGAACTCCCTCTCGATGTCCACAGCATCGCGCACAATCTCCCTCACGCGCTCCTCGGGGA 26200310 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAACTGTTGG--TGCAGACCCTCGT 251857 ||||| || || | ||||| || || | || || || | || |||||||||| Sbjct 26200311 GCTTGGTCCGCATAATAGAGTAGAGCAGGCAAGCGAA---GTCGCAATGGAGACCCTCGT 26200367 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 |||| ||||| |||||||| | | || || ||||| | || || ||| |||||| Sbjct 26200368 CGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCCCCGTTTCTTGAGCC 26200427 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||||||| ||| ||||| | | ||||||||| || | | || || | Sbjct 26200428 AGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGA 26200487 Query 251978 GGCGCTCAGCAAACGACT 251995 ||||||| || || |||| Sbjct 26200488 GGCGCTCGGCGAAGGACT 26200505 >seq5 Length=30687117 Score = 105 bits (116), Expect = 1e-17 Identities = 192/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| || || || | ||||| || ||| | | || |||||||| | |||| | Sbjct 609326 ACAAAGAACTAATATTGTTCTCTAGGGCGGATCTTCAACGGTCTATTCCTTCCATGGTTG 609267 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 ||||||||||||| || | ||||| || || | |||| ||| ||| || | Sbjct 609266 ATGGCCTCAAGCCTGGTCAAAGGAAGATTCTGTTCTGCTCATTTAAGAAGAAATTGTTCA 609207 Query 218648 AAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACG 218707 ||||||| || || || |||||| ||||||||| || || ||||| |||||||| | Sbjct 609206 AAGAAATAAAAGTAGCCCAGTTTATTGGTTATGTGTCTGAGCATTCTGCTTACCATCATG 609147 Query 218708 GTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||| || ||| | | | ||| | |||||||| || | |||||| || |||| Sbjct 609146 GTGAACAAAGTTTATCTAGCACAATTATTAATATGGCACAAGATTTTGTGGGTAGCAACA 609087 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808 |||| || | || || || ||||| |||||| ||||| Sbjct 609086 ACATCAATCTTCTTAAACCAAATGGTCAATTTGGTACTCGT 609046 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 2698411 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2698352 Query 142563 CCCCAC 142568 |||||| Sbjct 2698351 CCCCAC 2698346 >seq11 Length=26588826 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 11451143 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 11451084 Query 142563 CCCCACATCGGGC 142575 ||||||| |||| Sbjct 11451083 CCCCACAGTGGGC 11451071 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 11452237 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 11452178 Query 142563 CCCCACATCGGGC 142575 ||||||| |||| Sbjct 11452177 CCCCACAGTGGGC 11452165 >seq10 Length=40424437 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 ||| |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||| Sbjct 3409308 AGAAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 3409249 Query 142559 CGAGCCCCAC 142568 |||||||||| Sbjct 3409248 CGAGCCCCAC 3409239 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 3403737 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3403678 Query 142564 CCCAC 142568 ||||| Sbjct 3403677 CCCAC 3403673 >seq6 Length=19356003 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 1744937 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 1744996 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 1744997 AGCCCCAC 1745004 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 18926487 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 18926546 Query 142563 CCCCAC 142568 |||||| Sbjct 18926547 CCCCAC 18926552 >seq152 Length=2180754 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 776303 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 776244 Query 142562 GCCCCAC 142568 ||||||| Sbjct 776243 GCCCCAC 776237 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1554147 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1554088 Query 142563 CCCCAC 142568 |||||| Sbjct 1554087 CCCCAC 1554082 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1654602 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1654661 Query 142563 CCCCAC 142568 |||||| Sbjct 1654662 CCCCAC 1654667 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1656574 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1656633 Query 142563 CCCCAC 142568 |||||| Sbjct 1656634 CCCCAC 1656639 >seq9 Length=31747250 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 27630463 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 27630404 Query 142563 CCCCAC 142568 |||||| Sbjct 27630403 CCCCAC 27630398 >seq7 Length=39404547 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 5273255 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5273314 Query 142563 CCCCAC 142568 |||||| Sbjct 5273315 CCCCAC 5273320 >seq4 Length=34671004 Score = 87.8 bits (96), Expect = 4e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 27946934 ATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 27946993 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 27946994 AGCCCCAC 27947001 >seq2 Length=35625406 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 34777289 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 34777230 Query 142563 CCCCAC 142568 |||||| Sbjct 34777229 CCCCAC 34777224 >seq1 Length=42234885 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 16731271 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16731330 Query 142563 CCCCAC 142568 |||||| Sbjct 16731331 CCCCAC 16731336 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 32600042 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 32600101 Query 142563 CCCCAC 142568 |||||| Sbjct 32600102 CCCCAC 32600107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027344602682375