Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 seq3 87.8 2e-12 seq2 87.8 2e-12 seq6 86.0 5e-12 >seq1 Length=42234885 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| ||||||||||| | ||| ||| ||| || ||||| ||||| Sbjct 37707434 GTGGATTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCGAGTTGCTTACCC 37707493 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || || || || ||||| ||||||| ||| Sbjct 37707494 GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTTGCTTTC 37707553 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| |||||| || || | ||| | ||||||||||||| |||| Sbjct 37707554 ACGTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTTTTGCCGGTCAAAGTT 37707613 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 37707614 TTCACGAATATCTGCAT 37707630 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || ||||| || || || | || |||||||| || ||||| ||||| Sbjct 37702527 ATTCCACCACGAAGCCTCAACACCAAGTGCAGAGTGGATTCTTTCTGGATGTTATAATCT 37702586 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| | || || ||||| |||| || | ||| |||||||| Sbjct 37702587 GCAAGGGTACGCCCATCTTCCAACTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCCGGT 37702646 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||||| |||| | |||| ||||| | | ||| Sbjct 37702647 GGGATGCCTTCCTTGTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCA 37702706 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||| || |||||||||||||| Sbjct 37702707 ACCTCCAAAGTTATGGTTTTCCCAGTTAAAGTCTTCACAAAAATCTGCAT 37702756 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || ||||| ||||||||||||||||| | || | || || Sbjct 37703231 AACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 37703290 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||||||||||||| | || || | ||| || |||||||| || ||||||||||| Sbjct 37703291 AAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 37703350 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| ||| |||| |||||| || || | || | ||||| Sbjct 37703351 GATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCACCTCGAGTGTGATAGTTTT 37703410 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| |||||| || || || ||||| Sbjct 37703411 TCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| ||||||||||| || || |||||| |||||| | ||| || ||| Sbjct 37712227 GTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCA 37712286 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || || ||||| || ||||| ||||||| || Sbjct 37712287 GCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTC 37712346 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | ||| || |||| ||| | ||||| || |||||||| Sbjct 37712347 ACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTC 37712406 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||||||||||||| Sbjct 37712407 TTCACAAAAATCTGCATG 37712424 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || ||||| || || || | |||||||| || || ||||| ||||| Sbjct 37706717 ATTCCACCACGAAGCCTCAACACCAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCA 37706776 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || ||||| |||| || | || ||||| || Sbjct 37706777 GCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGT 37706836 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || |||||||| ||||||| |||| | |||| ||| || | | ||| Sbjct 37706837 GGAATCCCCTCTTTGTCCTGAATCTTTGCCTTTACATTATCAATGGTATCAGAGCTTTCA 37706896 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || ||||||||||| ||||| Sbjct 37706897 ACCTCCAAAGTAATGGTCTTTCCAGTCAACGTCTTTACAAAAATTTGCAT 37706946 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||||||||||||||| | |||||| ||| ||||| ||||| ||| Sbjct 6126243 GTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGACCATCCTCAAGCTGTTTGCCA 6126302 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | |||||||| || |||||||| || || ||||| ||||| |||||| ||| Sbjct 6126303 GCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGCTTTC 6126362 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || | | || || || | || | || || ||||| ||||| Sbjct 6126363 ACATTATCAATGGTATCTGAGCTCTCTACTTCGAGAGTGATGGTCTTACCGGTGAGAGTC 6126422 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 6126423 TTAACGAAGATTTGCAT 6126439 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || || || ||| |||||| | |||||| ||| Sbjct 37706522 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCA 37706581 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || |||||||| || ||||| ||||||| ||| Sbjct 37706582 GCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTC 37706641 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| ||| | || || || |||||||| Sbjct 37706642 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTC 37706701 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 37706702 TTCACAAATATCTGCAT 37706718 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||| ||||||||| | || | ||| ||||| ||||||||| Sbjct 37712911 GTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTCCCATCCTCAAGCTGTTTACCA 37712970 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | || || |||||||| || || |||||||| ||||| || Sbjct 37712971 GCAAAAATCAGCCTTTGCTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTAGCCTTG 37713030 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | ||||| || || | ||| | || ||||| |||| |||| Sbjct 37713031 ACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTTATGGTCTTGCCAGTCAAAGTT 37713090 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 37713091 TTCACAAAGATCTGCAT 37713107 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || |||||||| || || | ||||||||||| || ||||||||||| Sbjct 37706945 ATTCCCCCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCC 37707004 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||||||||| ||||| || || |||| || | ||| ||||| || Sbjct 37707005 GCAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGG 37707064 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| ||| | | |||| ||| || | || Sbjct 37707065 GGGATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCC 37707124 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || || || |||| ||| || ||||| || |||||| Sbjct 37707125 ACCTCTAAGGTTATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCATG 37707175 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||| |||||||| | || | ||| ||||||||||||||| Sbjct 37712683 GTTGACTCCTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCCTCAAGTTGTTTACCA 37712742 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| || || ||||| || || |||||||| ||||| || Sbjct 37712743 GCGAAAATAAGCCTCTGCTGATCAGGAGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTG 37712802 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || | || || |||| ||| | ||||| || |||| ||| Sbjct 37712803 ACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTC 37712862 Query 114366 TTTACAAAAATCTGCAT 114382 ||||||||||||||||| Sbjct 37712863 TTTACAAAAATCTGCAT 37712879 >seq3 Length=41204908 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| ||| | || ||| || ||||| || || || Sbjct 288770 GTGGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTTCCT 288711 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || || || || ||||| || ||||| ||||| || Sbjct 288710 GCGAAGATGAGACGCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 288651 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || || || || | ||| | || || || || || ||| Sbjct 288650 ACATTATCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTAAGGGTT 288591 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || |||||||| ||| Sbjct 288590 TTCACGAATATCTGCATCGCT 288570 >seq2 Length=35625406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | || ||| | || | || ||||| || |||||||||||||| Sbjct 31176280 CCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGCA 31176339 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | ||| || || ||||| || ||| |||| | | ||| |||||||| ||| Sbjct 31176340 AGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 31176399 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| ||||| || | | || | |||||| | | || || Sbjct 31176400 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACC 31176459 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || |||||||| ||||| || ||||| ||||||||| Sbjct 31176460 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATG 31176507 >seq6 Length=19356003 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || | ||| || || || ||||| || || Sbjct 11947047 GTGGACTCTTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCCTCGAGTTGCTTTCCT 11947106 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || ||||| || ||||| || ||||| ||||| || Sbjct 11947107 GCGAAGATGAGACGCTGCTGATCCGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 11947166 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || || || || | ||| | || || || || || ||| Sbjct 11947167 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTT 11947226 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 11947227 TTCACGAATATCTGCAT 11947243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419943025498500