Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 282 8e-71 >seq3 Length=41204908 Score = 282 bits (312), Expect = 8e-71 Identities = 505/727 (69%), Gaps = 14/727 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| |||||||| || || ||||| ||| | | || ||| Sbjct 26200767 CTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTAGAAAACCTTGCCGGCCGTTTTATG 26200708 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| ||| || ||||| ||| ||| |||||||||||||| || || |||||| Sbjct 26200707 AAGGAGGTCCAGGTCTCCGAGGCTCGCGCCTTTTACGGCTTCCAGATCGCTATCGAGAAC 26200648 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||||| | || ||| | || ||||| || |||| ||| Sbjct 26200647 ATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTCCGTAGAGAAA 26200588 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | | | || || | ||||| || || || |||||| ||| |||||||| ||||||| Sbjct 26200587 ACCCGTCTCTTTCACGCCATTGACACCATTCCCTGCGTCACCAAGAAGGCCAACTGGGCC 26200528 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 ||| ||||||||| || || | |||| |||| | || || |||||| || | Sbjct 26200527 CTCCGCTGGATCGA---CTCCTCCGAGTCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGC 26200471 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782 |||||||| ||||||||||| || ||| ||||||||||||||||||| | | || | Sbjct 26200470 GTCGAGGGTATCTTCTTCTCCGGAAGCTTTTGCTCCATCTTCTGGCTCAAG-AAACGGGG 26200412 Query 42783 TC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | ||||| |||||||| ||||| |||||||||||| | | |||||||| || ||| | Sbjct 26200411 CCTCATGCCAGGACTCACTTTCTCCAACGAACTCATCTCCCGCGACGAGGGTCTCCATTG 26200352 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 ||||| || ||||| || | ||| | | || ||||| | | ||||||| || Sbjct 26200351 CGACTTCGCTTGCCTGCTCTACTCTA---TTATGCGGACCAAGCTCCCCGAGGAGCGCGT 26200295 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 ||| || | || || ||||| ||||||| ||||||| || | |||| || Sbjct 26200294 GAGGGAGATTGTGCGCGATGCTGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTTCC 26200235 Query 42962 -CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 ||| | |||| || |||||| | | | ||| | ||||||| ||| || || | Sbjct 26200234 TTGTG-CGTTGGTGGGGATGAACGGGGCCTTGATGAGTCAGTACATTGAGTTTGTTGCTG 26200176 Query 43021 ACCATCTCCT--GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 | | || ||||| ||||| | | | ||||| | | ||| ||||| Sbjct 26200175 ATAGGTTGCTCGGTGCC-CTTGGGT-GCGGGAAGGTGTACAATGTACAGAACCCATTCGA 26200118 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 | |||||| || ||| || |||| ||||||||||| |||||||||||||| | || Sbjct 26200117 TTGGATGGAGCTGATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGGGGGA 26200058 Query 43139 CTACCAG 43145 |||||| Sbjct 26200057 GTACCAG 26200051 Score = 215 bits (238), Expect = 1e-50 Identities = 419/608 (69%), Gaps = 18/608 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| ||||||||||| || | || | || |||||||||||| ||| ||||||| Sbjct 34260790 ATCTGGGAAATGTACAAGAAAGCCGAAGCT-TCTTTCTGGACCGCCGAAGAGGTTGACCT 34260848 Query 42359 GGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAA 42417 || | ||| | ||| |||||| || || | || ||| ||| ||| Sbjct 34260849 CTCCCAAGACCTCCGCCA-CTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCC 34260907 Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 |||| || |||||||| |||||||| |||||||| || || ||||| || || | | Sbjct 34260908 ACATCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCTGCCCGCT 34260967 Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTT-CTACGGCTTCCAGATAGCCATA 42536 ||||||| || | || | ||||| || ||||| ||||||||||||||| ||||| Sbjct 34260968 TCATGAAGGAAATCCAAGCCGCCGAGGCTCG-TGCTTTCTACGGCTTCCAGATCGCCATC 34261026 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||||| | || ||| | || |||||| || || Sbjct 34261027 GAGAACATCCACTCCGAGATGTAC---AGTCTCCTCTTGGAAACCTACATCAAAGACTCC 34261083 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 ||| || |||||| ||| | || || || ||||| || |||||||| Sbjct 34261084 ACCGAAAAGAATCACCTGTTCCGCGCCGTCGATACCATCCCCTGTGTCGCCAAGAAGGCC 34261143 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCC 42713 | ||||| | ||||||||| ||||| | |||| |||| | || || ||| Sbjct 34261144 CAATGGGCCTTGCGCTGGATCGATGCCACCGACTCC---TTCGCCGAGCGCCTCGTCGCC 34261200 Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG 42773 || || ||| ||||| ||||||||||| ||| |||| ||| || || ||||||||| Sbjct 34261201 TTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGCTTCTGCTCGATATTTTGGCTCAAG 34261260 Query 42774 CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833 || | | ||||||||| ||||||||||| |||||||||||| | || || ||| Sbjct 34261261 AAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAAGGG 34261320 Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAG 42893 || || | ||||| || |||||| ||| ||| | ||||||| | |||| | | || Sbjct 34261321 CTTCACTGCGACTTCGCGTGCCTCTTGTACTC---TCTCCTCAGGAAGAAGCTCACCGAG 34261377 Query 42894 GAGCGGGT 42901 || || || Sbjct 34261378 GAACGCGT 34261385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943898016530000