Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 123 5e-23 >seq3 Length=41204908 Score = 123 bits (136), Expect = 5e-23 Identities = 304/455 (67%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || ||||| |||||||||| | |||||||| || || | || ||||| || Sbjct 34261177 TCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGC 34261236 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 |||||| | || |||||||| ||| || ||||||| || ||| | || ||| Sbjct 34261237 TTCTGCTCGATATTTTGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAAC 34261296 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAA 243464 || ||||| || || || || |||||| | |||| ||| || |||| || Sbjct 34261297 GAACTCATCTCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGC-CTCTTGTACTCTCT 34261355 Query 243465 GCTCCAGAACAAGCT-ACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAA 243522 ||| ||| ||||| ||| | |||| || || | || | ||||| ||||| Sbjct 34261356 CCTCAGGAAGAAGCTCACCGA--GGAACGCGTGAAGGAGATTGTGCGCGAAGCGGTTGAC 34261413 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | || | ||| || | |||||||| |||| || | | | || |||||| ||| Sbjct 34261414 ATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCTTGTGCGTTGGTGGGGATGAACGGGGAA 34261473 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 | ||| | ||||| || || || || || || || | | |||||||| | | | Sbjct 34261474 TTGATGAGTCAGTATATTGAGTTTGTCGCGGATCGGCTACTGGGTGCGCTTGGATGCGGG 34261533 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || |||||| |||| ||||||| | |||||||| || || || || |||||| Sbjct 34261534 AAGGTGTACGGTGTTCAGAATCCCTTTGATTGGATGGAGCTTATATCTCTCCAGGGGAAA 34261593 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||||||||| |||||||| || | || ||||| Sbjct 34261594 ACTAACTTCTTTGAAAAGCGCGTTGGGGACTATCA 34261628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102351866956250