Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 140 4e-28 seq182 111 2e-19 >seq3 Length=41204908 Score = 140 bits (154), Expect = 4e-28 Identities = 309/456 (68%), Gaps = 12/456 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT--CTCC 125815 ||| ||||| || ||||||||||||||||| |||||||| | || || || || |||| Sbjct 26200054 GTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCA-GC-GAAATCAGCTCC 26200111 Query 125816 ATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTG-GCACCCCAATCTGTTTGAGGAG 125874 || |||| |||||||||| | || | | | |||||| || ||| | Sbjct 26200112 ATCCAATCGAATGGGTTCTGTACATTGTACACCTTCCCGCACCC-AAGGGCACCGAGCAA 26200170 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 | ||| | || |||||||||||| | |||| | |||||| || | | Sbjct 26200171 CCTATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACCAACGC 26200230 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 ||| || |||||||| ||| |||| || |||| || ||||| || || ||||| || | Sbjct 26200231 ACAAGGAAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACAATCTC 26200290 Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAA 126051 | | ||| | | | | |||| | | | |||| || | || || Sbjct 26200291 CCTCACGCGCTCCTCGGGGAGCTTGGTCCGCATAATAGAGTAGAG---CAGGCAAGCGAA 26200347 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || |||||||||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 26200348 GTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCAT 26200407 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||| ||||| ||||| | |||||| || | ||||| || ||||||||||| ||||| Sbjct 26200408 GAGGCCCCGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTC 26200467 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 || || || || || | ||| ||||| || ||||| Sbjct 26200468 GACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGA 26200503 Score = 123 bits (136), Expect = 3e-23 Identities = 375/567 (66%), Gaps = 17/567 (3%) Strand=Plus/Minus Query 125759 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCA-AGCTGATATTCTCCAT 125817 ||||||||||| ||||| || |||||||| || ||||| | | || | ||| |||||| Sbjct 34261625 TAGTCCCCAACGCGCTTTTCAAAGAAGTTAGTTTTCCCCTGGAGAGAT-ATAAGCTCCAT 34261567 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC--CCAATCTGTTTGAGGAGA 125875 ||||||| || |||| || || | | | | |||| | || || Sbjct 34261566 CCAATCAAAGGGATTCT--GAACACCGTACACCTTCCCGCATCCAAGCGCACCCAGTAGC 34261509 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 ||||||| ||| ||||||| |||| | |||| || |||||| || | | | Sbjct 34261508 CGATCCGCGACAAACTCAATATACTGACTCATCAATTCCCCGTTCATCCCCACCAACGCA 34261449 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || |||||||| | | ||| || |||| || || || ||||| ||||| || | Sbjct 34261448 CAAGGAAGCGCGTCGCACACAAACTCCCTCTCTATGTCAACCGCTTCGCGCACAATCTCC 34261389 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGC---GCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 | | | ||| | | | || | | | || | ||||| |||| | || Sbjct 34261388 TTCACGCGTTCCTCGGTGAGCTTCTTCCTGAGGAGAGAGTACAAGAGG--CACG-CGAAG 34261332 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| || || || || || ||||||||||| || |||||| || || ||||| Sbjct 34261331 TCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATC 34261272 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 | || |||||||| | ||| || |||| || || || ||||||||||||||||| Sbjct 34261271 AAGCCACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCA 34261212 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTC 126232 || || ||||| || | ||| ||||| || |||||| || | | || | ||| | Sbjct 34261211 ACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAG-TCG--GTGGCATCGATCCAGCGC 34261155 Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 126292 | ||||| || ||||| || ||| ||| |||| ||| | || || || || | Sbjct 34261154 AAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGA 34261095 Query 126293 TTCTTTTCTGATGGA-TCTTTGATGTA 126318 |||||||| | |||| ||||||||||| Sbjct 34261094 TTCTTTTC-GGTGGAGTCTTTGATGTA 34261069 >seq182 Length=1065506 Score = 111 bits (122), Expect = 2e-19 Identities = 180/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 10820 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAG 10879 ||||| || ||| | ||| || || || ||||||| ||| ||||| | ||||| Sbjct 180405 TCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAAT 180464 Query 10880 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATA 10939 |||||||| || ||||| ||||| |||| ||| ||||| | |||||||||| | | Sbjct 180465 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCTCC---A 180521 Query 10940 CCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996 ||| || | || | |||| | || || || ||||||||||| | ||||| || || Sbjct 180522 CCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCAT 180581 Query 10997 GGTTGATTTTCACGGGCAACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCA 11054 || ||| || ||| |||| || | ||| ||||||| ||||| ||||| | Sbjct 180582 GGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAA 180639 Query 11055 CAAACATTTCCACAAA 11070 ||||||| |||||||| Sbjct 180640 CAAACATCTCCACAAA 180655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597074523865000