Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5 105 7e-18 seq1 100 3e-16 seq2 98.7 1e-15 seq109 96.9 4e-15 >seq5 Length=30687117 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 9179499 CTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 9179440 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | || |||||| ||| ||| || |||| | Sbjct 9179439 GATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 9179380 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| || | |||||||| || ||||| || || || || Sbjct 9179379 ATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCAC 9179320 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 9179319 GAATATCTGCATT 9179307 >seq1 Length=42234885 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| ||||| | ||||||||| | ||| |||||| ||||||||||||||||| Sbjct 37707176 CCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCA 37707235 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || | | || || || || || |||||||| || || | ||||||||| | || Sbjct 37707236 AGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGG 37707295 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || ||| ||||| ||| || || | | | | ||||| ||| || Sbjct 37707296 ATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTC---TCG 37707352 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || | ||||| |||||||||||||| Sbjct 37707353 ACCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || |||||||| || ||||| || | || || || |||||||| || || Sbjct 37707440 TCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAG 37707499 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| ||||||||| | ||| | | ||||||||| ||| | |||| || ||| Sbjct 37707500 ATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCT-TGAATCTTTGCTTTCACGTT 37707558 Query 42138 GCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 || | ||||| ||||| || || | |||||||||||||| || | || || || Sbjct 37707559 ATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTTTTGCCGGTCAAAGTTTTCAC 37707618 Query 42197 AAAGATTTGCAT 42208 || || ||||| Sbjct 37707619 GAATATCTGCAT 37707630 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || ||||| || | |||||| || | ||| |||||| |||||||||||||| || Sbjct 37712880 ACCACCCCTTAACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGC 37712939 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | | | || || ||||| |||||||| || || || | ||||| || | || Sbjct 37712940 AAGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGG 37712999 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| |||||| ||| || |||| | | | ||||| |||||| || Sbjct 37713000 GATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTAC 37713059 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| ||||| || | || || |||||||| ||||| Sbjct 37713060 TTCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/240 (70%), Gaps = 9/240 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| || | ||| |||||||||||| ||||||||||| || || || | Sbjct 6126224 ACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGACC 6126283 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || ||||| || ||||| || |||||||| | ||| | | ||||| Sbjct 6126284 ATCCTCAAGCTGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTT 6126343 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 ||| ||| | || | ||| | | | | || || |||| || || |||| | Sbjct 6126344 GTCT-TGAATCTTGGCTTTCACATTATCAATGGTATCTGAGCTC---TCTACTTCGAGAG 6126399 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCACGCCG-AATACAATG 42227 ||||||| || || || || ||||| || ||||||||||| | ||| | ||||| ||| Sbjct 6126400 TGATGGTCTTACCGGTGAGAGTCTTAACGAAGATTTGCATCTAGACGAGGCAATACGATG 6126459 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| ||||| | |||||| |||| || |||||| ||||||||||||||||| Sbjct 37712652 ACCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGC 37712711 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || || || ||||||||||| || || | |||||| || | || Sbjct 37712712 AAGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGG 37712771 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||| ||||| ||| || |||| | | | || || ||| || Sbjct 37712772 GATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTC---TC 37712828 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | || |||||||| || || | ||||||||||| || ||||| Sbjct 37712829 CACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || ||||| | ||||| || | ||| ||||||||||| ||||||||||| Sbjct 37703214 CCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCA 37703273 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || | |||| || || || ||||||||||| || || | |||||| || | || Sbjct 37703274 AGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGG 37703333 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || |||||| ||| || || | | | | || ||| |||||||| Sbjct 37703334 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCACC 37703393 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| ||||| || || | || || || ||||||||||| Sbjct 37703394 TCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||| |||| || | ||| ||| || ||||| ||||||||||| Sbjct 6125529 CCTCCACGAAGACGCAATACCAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCA 6125588 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | | || || | ||||| ||||| || || | | |||||| || | ||| Sbjct 6125589 AGAGTCCTCCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6125648 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| ||||||| |||| | | | || || ||| ||| Sbjct 6125649 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTATCAATTGTATCTGAGCT---TTCA 6125705 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || || || |||| ||||| |||||||| ||||| Sbjct 6125706 ACCTCCAAAGTGATAGTCTTCCCTGTTAAAGTCTTCACAAAGATCTGCAT 6125755 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || ||||| || ||||| |||| || || | || ||||| ||||| || || ||| Sbjct 6126021 TCTTTCTGAATGTTATAATCTGCCAAGGTTCGGCCATCTTCTAGTTGCTTTCCGGCAAAT 6126080 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||| | ||||||||| | ||| | | ||||||||| ||| | || | |||| | Sbjct 6126081 ATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCT-TGAATCTTGGCCTTGACATT 6126139 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| ||| || || | |||||||| || || || || ||||| Sbjct 6126140 GTCTATAGTGTCAGAGCT---TTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTT 6126196 Query 42194 TACAAAGATTTGCATT 42209 ||||||||||||||| Sbjct 6126197 GACAAAGATTTGCATT 6126212 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | || | ||| | ||| |||||| ||||| || |||||||| Sbjct 6125756 ACCTCCCCTCAGACGAAGTACAAGATGAAGAGTGGACTCCTTCTGAATGTTATAATCAGC 6125815 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| || | || || |||||||| ||||| || || | | |||||||| | || Sbjct 6125816 CAGAGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGG 6125875 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | || |||||||||| || || |||| | | | |||||| ||| || Sbjct 6125876 AATGCCCTCCTTGTCCTGTATCTTGGCCTTGACATTGTCAATCGTGTCTGAACTC---TC 6125932 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | || || ||||| || || || ||||| || || || ||||| Sbjct 6125933 CACCTCCAAAGTAATTGTTTTTCCAGTAAGGGTCTTGACGAAAATCTGCAT 6125983 >seq2 Length=35625406 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||||||||| || |||| | || || ||||| || || ||||| Sbjct 31176316 TCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAG 31176375 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | ||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 31176376 ATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 31176434 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || |||| |||||||| ||||| || || ||||| Sbjct 31176435 GTCGATGGTGTCAGAGCTC---TCAACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 31176491 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 31176492 CACAAAGATCTGCAT 31176506 >seq109 Length=622178 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | |||| ||| | ||| |||||| || || ||||| |||||| Sbjct 289697 CCTCCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 289756 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || || ||||| || ||||| || | ||||||||||| | ||| Sbjct 289757 AGGGTGCGACCATCCTCCAGTTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 289816 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG---CTCGATTC 42157 | | ||||||||| ||| |||| | | ||| | | | |||||| ||| || Sbjct 289817 ATCCCTTCCTTGTCC-TGAATTTTGGCCTTTACGTTGTCGATGGTGTCGGAACTC---TC 289872 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 ||| |||| || ||||| || || || | ||||| || ||||||||||| | ||| Sbjct 289873 CACCTCGAGAGTTATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCATCTGCAC 289929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542959017770000