Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq109 98.7 1e-15 seq5 98.7 1e-15 seq6 93.3 4e-14 seq2 89.7 5e-13 seq3 84.2 2e-11 >seq1 Length=42234885 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | |||||| | ||| || || | | || ||||||||||||||||| || Sbjct 37703213 GCCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 37703272 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | |||||| ||||||||||| | | || || | ||| || |||||||| Sbjct 37703273 AAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGG 37703332 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| || || | | || | ||| |||| || ||||| Sbjct 37703333 GATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCAC 37703392 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||||| || |||| |||||| || || || ||||| Sbjct 37703393 CTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| |||||||| || | ||| || ||||||||||| ||||| | | Sbjct 37707437 GATTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCGAGTTGCTTACCCGCA 37707496 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || | ||| ||||| || || ||||| || ||||| ||| | |||| ||| | Sbjct 37707497 AAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATCTTTGCTTTCAC 37707555 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| || || ||||| | || | ||||| || |||| |||||| Sbjct 37707556 GTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTTTTGCCGGTCAAAGTTTT 37707615 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 37707616 CACGAATATCTGCAT 37707630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||| | || || || | | |||||||||| ||||| ||||| || Sbjct 37712653 CCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGCA 37712712 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| ||||||||||| | | || || | ||| || || ||||| Sbjct 37712713 AGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGGG 37712772 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| ||| || || | | || | ||| || | ||||||| Sbjct 37712773 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACC 37712832 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| ||| ||||||||||||||||| Sbjct 37712833 TCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||||| |||||| | || ||||| | | | |||||||| ||||| ||||| || Sbjct 37707175 GCCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAGC 37707234 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | |||||||||||||| || | | || || | ||| ||||| ||||| Sbjct 37707235 AAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGG 37707294 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| || |||| | || | |||||| | ||| || Sbjct 37707295 GATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTCTCGAC 37707354 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||||| || |||| ||| || ||||| || |||||| Sbjct 37707355 CTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATG 37707403 >seq109 Length=622178 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | |||||||| || ||||||||||| | Sbjct 289697 CCTCCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 289756 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||| || |||| |||| | |||||| ||||| || || Sbjct 289757 AGGGTGCGACCATCCTCCAGTTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 289816 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| |||| | |||| | || | |||||||| |||||| Sbjct 289817 ATCCCTTCCTTGTC-CTGAATTTTGGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCAC 289875 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || |||||||||| || || || || || ||||| Sbjct 289876 CTCGAGAGTTATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 289923 >seq5 Length=30687117 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||||||| | || || ||||||||| || || |||| Sbjct 9179501 GACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCG 9179442 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || || || ||| || || | Sbjct 9179441 AAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACA 9179382 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || || || || ||||| Sbjct 9179381 TTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTC 9179322 Query 138601 ACAAAAATCTGCATGGC 138617 || || |||||||| || Sbjct 9179321 ACGAATATCTGCATTGC 9179305 >seq6 Length=19356003 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | ||| || |||||||||||| || || | Sbjct 11947050 GACTCTTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCCTCGAGTTGCTTTCCTGCG 11947109 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| || ||||| || || || || ||||| ||| || || | | Sbjct 11947110 AAGATGAGACGCTGCTGATCCGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACA 11947169 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||||||||| | || | || || || || || ||||| Sbjct 11947170 TTG-TCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTTTT 11947228 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 11947229 CACGAATATCTGCAT 11947243 >seq2 Length=35625406 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||||| || | | |||| ||||| || |||||||||||| Sbjct 31176963 GCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31177022 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||||| ||||| || | |||| | | ||| |||||||| || Sbjct 31177023 GAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGG 31177082 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || |||| | || | |||||| | |||||| Sbjct 31177083 AATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCAC 31177142 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || ||||| || ||||| ||||||||| Sbjct 31177143 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATG 31177191 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||||| || | | |||| ||||| || |||||||||||| Sbjct 31176735 GCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31176794 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||||| ||||| |||| |||| | | ||| |||||||| || Sbjct 31176795 GAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 31176854 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | |||||| | ||| | Sbjct 31176855 AATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTG-TCGATGGTGTCAGAGCTCTCAA 31176913 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || || || || || || ||||| ||||||||| Sbjct 31176914 CCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCATG 31176963 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | |||| ||||| || |||||||||||| Sbjct 31176507 GCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 31176566 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || ||||| |||| |||| | | ||| |||||||| || Sbjct 31176567 GAGGGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 31176626 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | |||||| | ||| | Sbjct 31176627 AATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTG-TCGATGGTGTCAGAGCTCTCAA 31176685 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || || || ||||| || ||||| ||||||||| Sbjct 31176686 CCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATG 31176735 >seq3 Length=41204908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| | || || ||||||||| ||||| || | Sbjct 291355 GACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGTTTTCCTGCG 291296 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| || || || || || || || || ||||| ||| || || | | Sbjct 291295 AAGATGAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 291236 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||||||||| | || | || || || || || ||||| Sbjct 291235 TTGT-CAATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTAAGGGTTTT 291177 Query 138600 TACAAAAATCTGCATGGC 138617 || || |||||||| || Sbjct 291176 CACGAATATCTGCATTGC 291159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496030552410000