Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 161 2e-34 >seq3 Length=41204908 Score = 161 bits (178), Expect = 2e-34 Identities = 494/755 (65%), Gaps = 23/755 (3%) Strand=Plus/Minus Query 159732 ATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCAC 159791 |||| || || |||| | || || || ||||| || || || || |||| || | Sbjct 34261528 ATCCAAGCGCACCCAGTAGCCGATCCGCGACAAACTCAATATACTGACTCATCAATTCCC 34261469 Query 159792 AGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGA 159851 ||| ||||||| || | | || ||||| || ||| ||||||| |||| || || | Sbjct 34261468 CGTTCATCCCCACCAACGCACAAGGAAGCGCGTCGCACACAAACTCCCTCTCTATGTCAA 34261409 Query 159852 CCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCT 159911 |||||||| |||||||| | || ||||| | |||| | | | | | Sbjct 34261408 CCGCTTCGCGCACAATCTCCTTCACGCGTTCCTCGGTGAGCTTCTTCCTGAGGAGAGAGT 34261349 Query 159912 TAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGG 159971 ||| ||||||||| ||||||||||| || || || || || ||||||| ||||||| Sbjct 34261348 ---ACAAGAGGCACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGG 34261292 Query 159972 ACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-A 160030 | | | |||| || ||||| | |||||| ||||||||||| || | ||| |||| Sbjct 34261291 AGAAGGTGAGACCGGGCATCAAGCCACGCTTCTTGAGCCAAAATATCG-AGCAGAAGCTG 34261233 Query 160031 CCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCG 160090 ||| || ||||| ||||| ||| || || || ||||| | ||| | | ||| | Sbjct 34261232 CCGGAGAAGAAGATTCCCTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCGA---AGGAG 34261176 Query 160091 TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGC 160150 | |||| ||| | |||| | |||||||| |||||||| |||| || || ||| Sbjct 34261175 TCGGTGGCATCGATCCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTA 34261116 Query 160151 TCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATC--A 160208 ||||||||| |||| | || || | || ||||| |||| || | Sbjct 34261115 TCGACGGCGCGGAACAGGTGATTCTTTTCGGTGGAGTCTTTGAT----GTAGGTTTCCAA 34261060 Query 160209 GCTTCGA--GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATA 160266 | || |||||| || | ||| | || |||||||| ||||| ||| ||||||| Sbjct 34261059 GAGGAGACTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGC 34261000 Query 160267 TGTCGCCTC--CAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACC 160324 ||||| | | | || | |||| |||| | | | || || | ||| Sbjct 34260999 ACGAGCCTCGGCGGCT--TGGATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACG 34260942 Query 160325 AACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTG 160384 | ||||||| ||| |||||||| || | | ||| | |||||| || | |||| | | | Sbjct 34260941 ATGCCGTCGGAGGCGGCAAAGAAGGCGAGGATGTGGGTGATGAAGTGGCGCTCGCCGTCG 34260882 Query 160385 TTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAA 160444 |||| |||||||| | |||||||| | ||||||||||| ||| |||| Sbjct 34260881 GTGAG---GGAGTCCCAGTGGCGGAGGTCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAG 34260825 Query 160445 TTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 | ||| | || | |||||||| ||||||| Sbjct 34260824 AAAGAAGCTTCGGCTTTCTTGTACATTTCCCAGAT 34260790 Score = 154 bits (170), Expect = 2e-32 Identities = 361/541 (67%), Gaps = 14/541 (3%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | | ||| ||||||||| ||||||||||| |||| || || || Sbjct 26200048 CTTCTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATCAG 26200107 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| | |||||||||||| || | || |||| | || || || | || Sbjct 26200108 CTCCATCCAATCGAATGGGTTCTGTACATTGTACACCTTCCCGCACCCAAGGGCACCGAG 26200167 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 |||||| || || ||||| || ||||| || |||| | | ||| ||||||| || Sbjct 26200168 CAACCTATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACCAA 26200227 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 | | || ||||| || | | |||||| |||| || || || || ||| |||||| Sbjct 26200228 CGCACAAGGAAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACAAT 26200287 Query 159868 CTGCGAGACACGTTCGTACCCCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCA 159924 || | || || || | ||||| | || ||| || | || ||||| Sbjct 26200288 CTCCCTCACGCGCTCCTCGGGGAGCTTGGTCCGCATAATAGAGT------AGAGCAGGCA 26200341 Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984 || |||||||| || || |||||||| || ||||||| |||||||| | |||| || Sbjct 26200342 AGCGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCC 26200401 Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGA 160043 ||||||| || || |||||||| || |||| |||||||| ||| || |||| Sbjct 26200402 TGGCATGAGGCCCCGTTTCTTGAGCCAGAAGATGG-AGCAAAAGCTTCCGGAGAAGAAGA 26200460 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 | ||||| ||| ||||| || ||||| | ||| | || || || || ||| | Sbjct 26200461 TACCCTCGACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGTC---GA 26200517 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163 |||| | |||||| | |||||||| | || ||| || ||| || | ||||| || Sbjct 26200518 TCCAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTGAA 26200577 Query 160164 A 160164 | Sbjct 26200578 A 26200578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794783713430000