Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 seq109 100 3e-16 seq1 91.5 2e-13 seq2 89.7 6e-13 >seq5 Length=30687117 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 9179499 CTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 9179440 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 9179439 GATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 9179380 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | |||||||| || ||||| || ||||| || Sbjct 9179379 ATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTTTTCAC 9179320 Query 46582 AAAGATTTGCATT 46594 || || |||||| Sbjct 9179319 GAATATCTGCATT 9179307 >seq109 Length=622178 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||||||| | || |||||| ||||| |||||||| | Sbjct 289697 CCTCCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 289756 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || || ||||| |||||||| ||||| ||||||||||| | || Sbjct 289757 AGGGTGCGACCATCCTCCAGTTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 289816 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG---CTCGATTC 46542 | | ||||||||| || || ||| | ||| | | | |||||| ||| || Sbjct 289817 ATCCCTTCCTTGTCCTGAATTTTGGCCTTTA-CGTTGTCGATGGTGTCGGAACTC---TC 289872 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | || ||||| || || |||| || ||||| ||||||||||| Sbjct 289873 CACCTCGAGAGTTATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 289923 >seq1 Length=42234885 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| || | |||||||| | || ||||| ||||| || || || Sbjct 37707440 TCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAG 37707499 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG-T 46521 || | | ||||||||| | || | | ||||||||| ||||| | ||| || | Sbjct 37707500 ATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTT-TGCTTTCACGTT 37707558 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||||| || || | |||||||||||||| |||| ||||| || Sbjct 37707559 ATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATGGTTTTGCCGGTCAAAGTTTTCAC 37707618 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 37707619 GAATATCTGCAT 37707630 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| ||||| | ||||| ||| | || |||||| || |||||||| || | Sbjct 37707174 TGCCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAG 37707233 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || ||||| || || || ||||| |||| | ||||||||| | | Sbjct 37707234 CAAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAG 37707293 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATT 46541 | | || ||| ||||| |||||| ||| | | | | ||||| ||| | Sbjct 37707294 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTC---T 37707350 Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || | || |||||||| || |||| || || |||||||||||||| Sbjct 37707351 CGACCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 >seq2 Length=35625406 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || ||||| | || ||||||||||| || ||||| Sbjct 31177228 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAG 31177287 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || |||||||| | || | | ||||||||| |||||| ||| | ||| Sbjct 31177288 ATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 31177346 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | || || |||| || || || | |||||||| || || || || || || Sbjct 31177347 GTCAATAGTATCGGAGCTC---TCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTT 31177403 Query 46579 AACAAAGATTTGCAT 46593 ||| ||||| ||||| Sbjct 31177404 AACGAAGATCTGCAT 31177418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564974327685000