Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq182 147 3e-30 seq3 134 2e-26 seq21 116 5e-21 seq235 102 1e-16 seq9 102 1e-16 seq4 102 1e-16 seq8 93.3 5e-14 >seq182 Length=1065506 Score = 147 bits (162), Expect = 3e-30 Identities = 314/463 (68%), Gaps = 12/463 (3%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||| | | || || || || ||||||| ||||| || | ||||| Sbjct 180404 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 180463 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 |||||||| ||||||||||| ||||| | || ||||| | |||||||||| || Sbjct 180464 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 180520 Query 16037 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 |||| |||| || | |||| |||| || |||||||| ||||||| || || ||||| Sbjct 180521 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 180580 Query 16094 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 ||| ||| || || |||| || | ||| || || || || || |||||| Sbjct 180581 TGGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCA 180638 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||||||||| | | | | | |||| | || |||||| | |||||| Sbjct 180639 ACAAACATCTCCACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACC 180697 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 180698 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 180757 Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330 | ||| || || ||| || | ||||||| || | |||||||| ||||| | Sbjct 180758 TTTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCGGGCTTTTTAAGAAATTCCACCAC 180817 Query 16331 CTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCG 16373 ||| || || | |||||| |||| | || |||||||| Sbjct 180818 CTCCATAAAATCCTGTTTGGCTTCGTCCACTCCAGCAACATCG 180860 >seq3 Length=41204908 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| |||| ||||| || || ||||||||||||||||| || | Sbjct 26200503 TCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGC 26200444 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| | || | ||||||||||| || || ||||||||||| ||| ||||||||| Sbjct 26200443 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAAC 26200384 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCA 102319 || || ||||| || |||||||| ||||| Sbjct 26200383 GAACTCATCTCCCGCGACGAGGGTCTCCA 26200355 Score = 127 bits (140), Expect = 3e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| |||| || || || |||||||| ||||||||||| || | Sbjct 34261177 TCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGC 34261236 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| | || | ||||||||||||||| || | ||||| |||||| |||||||||| Sbjct 34261237 TTCTGCTCGATATTTTGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAAC 34261296 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || ||||| || || || || || ||| Sbjct 34261297 GAACTCATCTCGCGAGATGAAGGGCTTCAC 34261326 >seq21 Length=722760 Score = 116 bits (128), Expect = 5e-21 Identities = 306/461 (66%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || ||||||| || || || | |||||| Sbjct 271403 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 271344 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || || || | ||||||||| || | Sbjct 271343 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTTCCT---CCA 271287 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 271286 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 271227 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||||| || |||| || | ||| || || || || || ||||||| Sbjct 271226 GGGGCGTTTTCTTTGGC--CTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 271169 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | ||| | |||| | || || ||| || |||||| Sbjct 271168 CAAACATCTCAACAAACTCAGAACCGG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 271110 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 271109 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 271050 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 || || || ||| || | | |||||||| | ||| ||||| ||||| | | Sbjct 271049 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACC 270990 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | ||||| | || | ||| ||||||| Sbjct 270989 TCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 270949 >seq235 Length=417634 Score = 102 bits (112), Expect = 1e-16 Identities = 178/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || ||||||| ||||| || | | |||| Sbjct 284057 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTTAAAA 283998 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || || || | |||||||||| || | Sbjct 283997 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 283941 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 283940 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 283881 Query 16095 GGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || | ||| | | ||||| || | ||| || || || || || ||| ||| Sbjct 283880 GG--GGCGTTCTCTTTGGCCTTCATGAACAAATCACGAACTCGAGAAGCACCAACATCAA 283823 Query 16153 CAAACATCTCCACAAA 16168 |||||||||| ||||| Sbjct 283822 CAAACATCTCAACAAA 283807 >seq9 Length=31747250 Score = 102 bits (112), Expect = 1e-16 Identities = 249/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 16031 ||| ||||||||||| |||| |||||||||||| || ||||||| ||||| || | | Sbjct 3997753 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 3997694 Query 16032 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 || | || || | | ||| | |||||||| ||||||||||||||||| || ||| Sbjct 3997693 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 3997636 Query 16092 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || || || | ||||| | ||||| | ||||| || | | || || || Sbjct 3997635 CACGGCGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 3997580 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| |||||| || | | || | || || || || || | ||| Sbjct 3997579 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 3997520 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||||| | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 3997519 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGGTGGCCCCACCA-GAAGAC 3997461 Query 16268 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 3997460 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 3997401 Query 16327 CAATCTCTTCCA 16338 ||| ||||| || Sbjct 3997400 CAACCTCTTGCA 3997389 >seq4 Length=34671004 Score = 102 bits (112), Expect = 1e-16 Identities = 178/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || ||||||| ||||| || | |||||| Sbjct 10195157 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 10195216 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | ||||| || | |||||||||| || | Sbjct 10195217 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTTTGCTCTCTTTCATCATTCCCT---CCA 10195273 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | ||| |||| || ||||||| ||||||| ||||| ||||| Sbjct 10195274 CCAATTCCAGTTCCTCTTTGTCTTCCAACATCATCAATTTCATCAACAAAGACAATGCAA 10195333 Query 16095 GGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || | ||| | | ||||| || | ||| || || || || || ||| || Sbjct 10195334 GG--GGCGTTCTCTTTGGCCTTCATGAACAAATCACGAACTCGAGAAGCACCAACATTAA 10195391 Query 16153 CAAACATCTCCACAAA 16168 |||||||||| ||||| Sbjct 10195392 CAAACATCTCAACAAA 10195407 >seq8 Length=30791815 Score = 93.3 bits (102), Expect = 5e-14 Identities = 214/319 (67%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 15936 TTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAA 15995 || ||||| || ||||||| |||| || | | |||||||||||| | ||||||| Sbjct 7412085 TTAGTTGCTGCAATGACAATGATACTAGTATTACCCTTAAAACCATCCATTTATGTCAAA 7412144 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGT 16052 || ||||| | || || | | |||||||||| || |||| |||| | | | Sbjct 7412145 AGTTGGTTGAGGGTCTGCTTTCTTTCATCATTCCCT---CCACCAATTCCAGTTCCTCTT 7412201 Query 16053 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 16112 || |||| || |||||||| ||||||| ||||| ||||| || | ||| | | Sbjct 7412202 TGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAAGG--GGCGTTCTCTTTGG 7412259 Query 16113 ACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 16170 ||||| || | ||| || || || || || ||||||||||||||||| ||||| | Sbjct 7412260 CCTTCATGAACAAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACT 7412319 Query 16171 TTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 16230 | | || | | || || ||| || |||||| ||||| || ||| | | Sbjct 7412320 CAGAACCAGATATTAAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACA 7412379 Query 16231 GAGTCTTACCCGTACCTGG 16249 | ||||| || || ||||| Sbjct 7412380 GGGTCTTCCCAGTTCCTGG 7412398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620452396910000