Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 120 4e-22 seq10 84.2 3e-11 seq1 84.2 3e-11 >seq3 Length=41204908 Score = 120 bits (132), Expect = 4e-22 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCC 119566 ||| || || || || || |||||||| || || ||| ||||| |||||||| || Sbjct 26200354 ATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCC 26200413 Query 119567 TCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACA 119626 | |||||| ||||| ||||||| ||||| ||||| || |||||||| ||||| || || Sbjct 26200414 CCGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCA 26200473 Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAAAGG-TCGAGACTTGTCGAACCACTTGAGAGCCC 119685 ||| || |||| || ||||| || || | ||| || ||||| ||| ||| |||| Sbjct 26200474 GGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCG-GAGGAGTCGATCCAGCGGAGGGCCC 26200532 Query 119686 AGTTGGCCTT 119695 |||||||||| Sbjct 26200533 AGTTGGCCTT 26200542 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 |||||||||||||| || |||||||| || || |||| || || ||||| | || Sbjct 34261325 TGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCCA 34261266 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| |||||||| || | || || || || || |||||||| ||||| || ||| Sbjct 34261265 CGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCAG 34261206 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653 ||||| |||| || ||||| || || Sbjct 34261205 GCGAAGGCGACGAGGCGCTCGGCGAA 34261180 >seq10 Length=40424437 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | |||||||| || Sbjct 12157268 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGAGACC 12157213 >seq1 Length=42234885 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | |||||||| || Sbjct 4527912 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGAGACC 4527857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588700837775000