Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq182 154 2e-32 seq3 125 8e-24 seq21 123 3e-23 seq1 120 4e-22 seq235 105 8e-18 seq4 105 8e-18 seq9 102 1e-16 seq8 98.7 1e-15 seq25 91.5 2e-13 >seq182 Length=1065506 Score = 154 bits (170), Expect = 2e-32 Identities = 313/461 (68%), Gaps = 8/461 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9283 |||||| || ||| | | || || || || ||||||| ||||| || | | ||||| Sbjct 180404 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 180463 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || Sbjct 180464 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 180520 Query 9344 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 |||| |||| || | |||| |||| || |||||||| ||||||| || ||||| || Sbjct 180521 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 180580 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 ||| ||| || ||| | | || | |||||| || | || || |||||||| Sbjct 180581 TGGAGCATTCTCTTTGGCCTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAAC 180640 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9519 ||||||||||||||| | | | | | |||| | || |||||| | |||||| | Sbjct 180641 AAACATCTCCACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACCTG 180699 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCC 9579 |||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 180700 CAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTT 180759 Query 9580 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCT 9639 ||| || || ||| || | ||||||| || | || ||||| ||||| | || Sbjct 180760 TTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCGGGCTTTTTAAGAAATTCCACCACCT 180819 Query 9640 CTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCG 9680 | || || | |||||| |||| | || |||||||| Sbjct 180820 CCATAAAATCCTGTTTGGCTTCGTCCACTCCAGCAACATCG 180860 >seq3 Length=41204908 Score = 125 bits (138), Expect = 8e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 ||||||||||| || ||||| || ||||| || ||||| || ||||||||||| ||| Sbjct 26200355 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCCC 26200414 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 || ||||| | ||| | || | ||| || |||||||||||||||||||| || || Sbjct 26200415 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCAG 26200474 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 ||||| || | ||||||||||||||||| Sbjct 26200475 GCAAAGGCGACGAGGCGCTCGGCGAAGGA 26200503 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || || |||||||| || || ||||| || |||||| || || ||||| | || Sbjct 34261326 GTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCC 34261267 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | |||| | || | |||||| |||||||||||||| ||||| || || Sbjct 34261266 ACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCA 34261207 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 || || || | |||||||||||||||||| Sbjct 34261206 GGCGAAGGCGACGAGGCGCTCGGCGAAGGAG 34261176 Score = 89.7 bits (98), Expect = 6e-13 Identities = 186/273 (68%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 |||||||||||||| | ||||||||||||||| | ||||| || |||||||||| || Sbjct 13118533 TCAAAACCATCCATTTATGTCAAAAGTTGGTTGAGGGTTTGCTCTGTTTCATCATTCCCT 13118592 Query 9339 GGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACA 9395 |||| |||| | | ||| |||| || ||| ||| | ||||| ||||||| Sbjct 13118593 ---CCACCAATTCCAGTTCCTCTTTGTCTTCCAACAACATGAATTTAATCAAGGAAGACA 13118649 Query 9396 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 || | || || || ||| ||| || | ||| | ||| | || || ||| Sbjct 13118650 ATGAAAGGGGCGTTCTCTTTGGCCTTTTTGAACAAATCACAAACTCGAAAAGCACCAACA 13118709 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9514 |||||||||||||| ||||| | | | | | |||| | || || ||| || ||| Sbjct 13118710 CCAACAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAATAATGGAACACAAGCTTC 13118768 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 ||| ||||| || ||| | ||| ||||| || Sbjct 13118769 ACCAGCAATAGCCTTGGCCAAAAGGGTCTTCCC 13118801 >seq21 Length=722760 Score = 123 bits (136), Expect = 3e-23 Identities = 305/459 (66%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || ||||||| || || || | | |||||| Sbjct 271403 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 271344 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || || || | ||||||||| || | Sbjct 271343 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTTCCT---CCA 271287 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| |||| || |||||||| ||||||| |||||||| || Sbjct 271286 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 271227 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||||| ||| | | || | ||| ||||| | || || ||||||||| Sbjct 271226 GGGGCGTTTTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACA 271167 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | ||| | |||| | || || ||| || |||||| || Sbjct 271166 AACATCTCAACAAACTCAGAACCGG-ATATTGAAAAAAATGGAACACCAGCTTCACCAGC 271108 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || ||| | || ||||| || || ||||| ||| | || || | || Sbjct 271107 AATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTT 271048 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || || || ||| || | | |||||||| | ||| ||||| ||||| | ||| Sbjct 271047 AGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTC 270988 Query 9641 TTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | ||||| | || | ||| ||||||| Sbjct 270987 CATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 270949 >seq1 Length=42234885 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||| ||||| ||||| || || ||||| || ||||| | ||| ||| ||||| | ||| Sbjct 1929760 CTGTGGTCTAGGTGTTCCCGCGTTGAAAAGAGTTGGAGATGCATGAGTGAACCACCGTTG 1929701 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| || ||| || | | ||| ||||||||||||| || || || | || Sbjct 1929700 AGACATCAGGTGGTAAGTTTTGACAGCAGCATCAATGTCTTCCTTATGAATTCCAACAGC 1929641 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 107345 || | ||| ||||||| ||| ||| |||||| | |||| | || || || | || | Sbjct 1929640 GACCCTCATCAACATGTGTTGTGGTCTTTCCACAACCTTGCC-TTGAACCTTTAAGAGGT 1929582 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 || | ||||||||||||||| |||||| ||| || | ||| |||||| Sbjct 1929581 AGGACCTCTCAAGGGTTTTGAAACCAAAATAATCATAGTCAAAGTCCC 1929534 >seq235 Length=417634 Score = 105 bits (116), Expect = 8e-18 Identities = 179/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || ||||||| ||||| || | | | |||| Sbjct 284057 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTTAAAA 283998 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 283997 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 283941 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| |||| || |||||||| ||||||| |||||||| || Sbjct 283940 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 283881 Query 9402 GGTTGATTTTCGCGGGCGATTTCA--AAGAGATCGCGAACCCTTTTGGCGCCCACACCAA 9459 || || || ||| |||| || | ||| ||||| | || || ||| ||| Sbjct 283880 GGGGCGTTCTCTTTGGC--CTTCATGAACAAATCACGAACTCGAGAAGCACCAACATCAA 283823 Query 9460 CAAACATCTCCACAAA 9475 |||||||||| ||||| Sbjct 283822 CAAACATCTCAACAAA 283807 >seq4 Length=34671004 Score = 105 bits (116), Expect = 8e-18 Identities = 179/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || ||||||| ||||| || | | |||||| Sbjct 10195157 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 10195216 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | ||||| || | |||||||||| || | Sbjct 10195217 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTTTGCTCTCTTTCATCATTCCCT---CCA 10195273 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| |||| || ||||||| ||||||| |||||||| || Sbjct 10195274 CCAATTCCAGTTCCTCTTTGTCTTCCAACATCATCAATTTCATCAACAAAGACAATGCAA 10195333 Query 9402 GGTTGATTTTCGCGGGCGATTTCA--AAGAGATCGCGAACCCTTTTGGCGCCCACACCAA 9459 || || || ||| |||| || | ||| ||||| | || || ||| || Sbjct 10195334 GGGGCGTTCTCTTTGGC--CTTCATGAACAAATCACGAACTCGAGAAGCACCAACATTAA 10195391 Query 9460 CAAACATCTCCACAAA 9475 |||||||||| ||||| Sbjct 10195392 CAAACATCTCAACAAA 10195407 >seq9 Length=31747250 Score = 102 bits (112), Expect = 1e-16 Identities = 249/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9338 ||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | | Sbjct 3997753 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 3997694 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 || | || || | | ||| | |||||||| ||||||||||||||||| ||||| Sbjct 3997693 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 3997636 Query 9399 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || || || | ||| || | ||||| | ||| | ||||| || || || Sbjct 3997635 CACGGCGCCTTATTCTTC----GCCTTCTCAAACAAATCCCTCACCCTCGACGCACCAAC 3997580 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 || ||||||| |||||| || | | || | || || || || || | ||| Sbjct 3997579 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 3997520 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||||| | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 3997519 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGGTGGCCCCACCA-GAAGAC 3997461 Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 ||||| | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 3997460 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 3997401 Query 9634 CAATCTCTTCCA 9645 ||| ||||| || Sbjct 3997400 CAACCTCTTGCA 3997389 >seq8 Length=30791815 Score = 98.7 bits (108), Expect = 1e-15 Identities = 215/319 (67%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 9243 TTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAA 9302 || || || || ||||||| |||| || | | | |||||||||||| | ||||||| Sbjct 7412085 TTAGTTGCTGCAATGACAATGATACTAGTATTACCCTTAAAACCATCCATTTATGTCAAA 7412144 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGT 9359 |||||||| | || || | | |||||||||| || |||| |||| | | | Sbjct 7412145 AGTTGGTTGAGGGTCTGCTTTCTTTCATCATTCCCT---CCACCAATTCCAGTTCCTCTT 7412201 Query 9360 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 || |||| || |||||||| ||||||| |||||||| || || || || ||| Sbjct 7412202 TGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTCTCTTTGGC- 7412260 Query 9420 ATTTCA--AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 |||| || | ||| ||||| | || || ||||||||||||||||| ||||| | Sbjct 7412261 -CTTCATGAACAAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACT 7412319 Query 9478 TTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | || | | || || ||| || |||||| ||||| || ||| | | Sbjct 7412320 CAGAACCAGATATTAAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACA 7412379 Query 9538 GAGTCTTACCCGTACCTGG 9556 | ||||| || || ||||| Sbjct 7412380 GGGTCTTCCCAGTTCCTGG 7412398 >seq25 Length=312266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || || || || || ||||||||||| || || || | |||||| ||||| | ||| Sbjct 241939 TGAGGCCTAGGAGTTCCAGCATTGAAAAGAGTAGGAGATGCGTGGGTGAACCATCGTTGA 241880 Query 107228 GACATCTTGTCGTATG-TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| ||| ||| | ||| || |||| || ||||| ||| ||| || || | || Sbjct 241879 GACATCATGTGGTAAGTTCTGACAG-CAGATTCTATGTCATCCTTGTGAATCCCAACCGC 241821 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 107345 || | ||| ||||||| ||| || |||||| | | || | || || || | || | Sbjct 241820 GACTCTCATCAACATGTGTTGCGGCCTTTCCA-CAACCTTCCCTTGAACCTTTAAGAGGT 241762 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 | | ||||||||||||||| ||||| ||| || | || |||||| Sbjct 241761 AAGACCTCTCAAGGGTTTTGAACCCAAAATAATCATAGTCGAAGTCCC 241714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589705168345000