Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq37374 479 3e-130 seq6 187 3e-42 seq7 129 7e-25 seq4 109 6e-19 seq9 105 8e-18 >seq37374 Length=151683 Score = 479 bits (530), Expect = 3e-130 Identities = 674/944 (71%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | |||||||| ||| | || ||| | | ||| || || Sbjct 4272 TTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATT 4214 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || || || || || ||||| || ||||| || || || | || || || | || Sbjct 4213 ATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGA 4154 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | ||||| ||||| ||||| |||||||| || |||| | || ||||| Sbjct 4153 TCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATA 4094 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | || || || || || ||||||||||| |||||||||||||||| || || || Sbjct 4093 GGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGC 4034 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | |||||||| | Sbjct 4033 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGT 3974 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | || |||||||||||||| ||||||||| || || Sbjct 3973 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 3914 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | || || ||||| ||||| | || || ||||||| || || || Sbjct 3913 CCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCG 3854 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||||| || || ||||||||||| |||||| | || || || || ||| Sbjct 3853 GATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAG 3794 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 ||||| ||||| |||||||| || |||||| ||| ||||| || | ||||| || || Sbjct 3793 CATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCC 3734 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || ||||||||||| | || ||||| | | ||||| ||||| ||||| Sbjct 3733 CTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 3674 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | || || ||||| |||||||| || || || ||| Sbjct 3673 AATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTA 3614 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| ||||| |||||||| || | Sbjct 3613 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGT 3554 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| ||||||||||| | || ||||| ||| || | ||||| ||| || | ||| Sbjct 3553 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGT 3494 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 ||| |||| ||||| |||||||| |||||||| || || |||||||| || |||||| | Sbjct 3493 ATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGT 3434 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| |||| ||| | ||||||||| Sbjct 3433 CAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 3374 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384 || ||||||||| | ||||| || || ||||| ||||| ||||| Sbjct 3373 GTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 3330 Score = 370 bits (410), Expect = 1e-97 Identities = 709/1044 (68%), Gaps = 33/1044 (3%) Strand=Plus/Minus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | || |||||||| ||| || ||||| || || | || ||||| ||| Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || ||||| | ||||| || || | | | || |||||||| ||| || ||||| Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| || || | || || ||| | || || || |||||| || Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTA 30982 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGC-AATGGGT---CATAGTCTTC--TGTTCCTT 170762 || || ||||||||||| || ||| ||| | | || | |||| |||| || Sbjct 30981 ACCGCTGCAGTTTCCACTCC------CGCTAATAGTTTAGCACACTCTTTGTTGTTACTG 30928 Query 170763 TGGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAAC 170822 ||||| ||||||||||| || ||| ||||||| || | || ||| | |||| Sbjct 30927 TGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACT 30868 Query 170823 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATC 170882 ||||| || | || || | || ||| | |||||||||||| | | |||||||| | Sbjct 30867 TTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTT 30808 Query 170883 GCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTC 170942 || || ||| | ||||||| || ||| |||||||||| | | || || || Sbjct 30807 GCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTT 30748 Query 170943 TTCACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCA 171002 || | | ||||| || |||||||| |||||| |||||||||| || || Sbjct 30747 TTTGTTTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGT 30688 Query 171003 TTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACA 171062 || ||||| ||||| || ||||| | ||| | || | ||||| || || || ||| Sbjct 30687 TTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACA 30628 Query 171063 TTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCC 171122 || || |||||||| |||||||| ||||| || || | || | ||| || |||| || Sbjct 30627 TTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCT 30568 Query 171123 ATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAAT 171182 |||||||||||||| || | || || || | ||||| || |||| Sbjct 30567 ATTCATGGTGCAACCGTAGAAAATACTTTATTTGAAG------------ATGGTGAT--- 30523 Query 171183 AAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGT 171242 | |||| ||||||||||| ||| | || || || | ||||||||||| Sbjct 30522 --GGTGCAAA----TACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCA 30469 Query 171243 ATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGA 171302 ||| |||| || || | || ||||| || || ||||| ||||||| || || ||| | Sbjct 30468 ATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGT 30409 Query 171303 TTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGT 171362 | ||||| ||| ||||||| || || || || | ||| | |||| || | || Sbjct 30408 TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGG 30349 Query 171363 ATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCA 171422 | || ||| | || || ||| | | || || || || || |||||||| || | ||| Sbjct 30348 GTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCA 30289 Query 171423 GCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATG 171482 || ||||| || || || |||||||||||||| || ||||| || | || |||||||| Sbjct 30288 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATT 30229 Query 171483 AGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTG 171542 | || |||||| || | || || || ||||| ||| | ||||||| || || || Sbjct 30228 CGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTT 30169 Query 171543 TTACCAAGAGGTAACGCACTTTAA 171566 ||||| | || ||||| |||||| Sbjct 30168 CTACCACGTGGAAACGCTCTTTAA 30145 >seq6 Length=19356003 Score = 187 bits (206), Expect = 3e-42 Identities = 298/428 (70%), Gaps = 0/428 (0%) Strand=Plus/Plus Query 169957 GTAGCAGGAATGTTCGGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCA 170016 ||||| || | ||||| || || ||||| | ||| ||||||| | || ||||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 170017 TCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAA 170076 | | || || ||||| ||||| | || | || | ||||| || || || ||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 170077 GAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAG 170136 ||||||||||| || || || ||||| || || | || ||||| || | |||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 170137 TATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTA 170196 ||||| |||||||| || | | ||| ||||||||||| | || ||| | ||| Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 170197 TGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAAC 170256 || | ||||| ||| || | |||||| |||| |||| |||||||| |||||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 170257 TTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTA 170316 || |||||||| || ||||| | | || | | || |||| |||| || | Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 170317 AACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTA 170376 ||| |||| ||| | ||||||||||| ||| ||||| | ||||| || || || || || Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTTA 3411193 Query 170377 GACCTAGC 170384 || |||| Sbjct 3411194 GATTTAGC 3411201 >seq7 Length=39404547 Score = 129 bits (142), Expect = 7e-25 Identities = 154/207 (74%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 || |||||||| |||| ||||| ||||||||||||||||| || ||||| || ||| || Sbjct 36124390 CAGAGGTTTGGAGTTCCAATGGGCTATGGAGGTCCTCATGCAGCTTTCTTGGCCACATCA 36124449 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG--GTCAGTCAGTAGATAGTGAAG 153885 | |||| ||||| | ||| || || ||||| | | |||||| || ||| | || Sbjct 36124450 CAAGAGTACAAGAGGATGATGCCAGGGAGAATCATTGGAGTCAGT--GTTGATTCTACAG 36124507 Query 153886 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAG 153945 | || | || || | ||| | || ||||| ||||||||||||||||| ||||| | Sbjct 36124508 GAAAGACTGCTCTGAGGATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGG 36124567 Query 153946 CAACCAGTAACATCTGCACAGCTCAGG 153972 | ||||| ||||| ||||| || |||| Sbjct 36124568 CTACCAGCAACATTTGCACTGCCCAGG 36124594 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 ||||| ||| ||||||||| |||||||| || || ||||||||||||||||| || Sbjct 36123889 GAGAACCCTGCTTGGTACACTCAGTACACTCCTTACCAGGCTGAGATATCTCAGGGGAGG 36123948 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 | || | | | |||||||| || | ||||| || || || || || || || | Sbjct 36123949 CTTGAGTCACTGCTGAATTACCAGACCATGATCACTGACCTCACTGGCTTGCCCATGTCC 36124008 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || || || | | ||||| | ||||| ||||| || |||||| Sbjct 36124009 AATGCCTCATTGCTTGATGAGGGCACTGCTGCAGCTGAGGCAATG 36124053 >seq4 Length=34671004 Score = 109 bits (120), Expect = 6e-19 Identities = 162/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 || |||| ||| || || || ||||||||| |||| ||||| ||||| ||||| ||| Sbjct 32893478 GACATTGTTGTTGGGTCTACTCAGAGGTTTGGTGTTCCAATGGGTTATGGGGGTCCACAT 32893537 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG- 153865 |||| ||| | || ||| || | ||||||| || | ||||||| || ||| | || Sbjct 32893538 GCTGGGTTCCTGGCCACATCACAAGAGTATAAAAGGTTGGTACCTGGAAGGATTATTGGG 32893597 Query 153866 -TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 153924 ||||| || ||| | || || || | ||| | || | || ||||| |||| Sbjct 32893598 CTCAGT--GTTGATTCTTGTGGAAAGTCGGCTTTGAGAATGGCCTTGCAAACTAGGGAGC 32893655 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972 ||||||| | || ||||| || ||||| ||||| ||||| ||||||| Sbjct 32893656 AGCATATTCGCAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGG 32893703 >seq9 Length=31747250 Score = 105 bits (116), Expect = 8e-18 Identities = 219/328 (67%), Gaps = 21/328 (6%) Strand=Plus/Minus Query 170972 AGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGTGTCGCAGCAATTTTTCGTTATAT 171031 ||||||| |||||||||| || || || ||||| ||||| || ||||| | || Sbjct 26587603 AGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCAT 26587544 Query 171032 CTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGATGGGTGTTGC 171091 | | || | ||||| || || || ||||| || |||||||| |||||||| ||||| Sbjct 26587543 CCTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGC 26587484 Query 171092 AGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCAACAGTGCAGAACACATT 171151 || || | || | ||| || |||| || |||||||||||||| || | || || || Sbjct 26587483 TGGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTT 26587424 Query 171152 GTATGAAGACACATCAGTTTATACTGATAATAAAATTCAAAGCACAACATTCCGTGCCTT 171211 | ||||| || |||| | |||| |||||| |||| || Sbjct 26587423 ATTTGAAG------------ATGGTGAT-----GGTGCAAA----TACATTCTGTGCTTT 26587385 Query 171212 TGATCCTACACAGGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACA 171271 | | || || || | ||| ||||||| ||| |||| || || | || ||||| || Sbjct 26587384 TAACCCAACCCAAGCTGAAAAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCA 26587325 Query 171272 GATATTTGGTATTGCTTTCTCTAACAAA 171299 || ||||| ||||||| || || ||| Sbjct 26587324 AATCTTTGGGTTTGCTTTTTCCAATAAA 26587297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578942199020000