Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq37374 605 3e-168 seq6 271 8e-68 seq9 199 4e-46 seq5 109 6e-19 seq456 82.4 8e-11 >seq37374 Length=151683 Score = 605 bits (670), Expect = 3e-168 Identities = 715/962 (74%), Gaps = 6/962 (1%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 || || || || |||| ||||| || ||| ||||||| ||||| | | | ||||| Sbjct 4285 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACT 4226 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || |||| || ||||||| || || || || || |||||||||||||| Sbjct 4225 -TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 4167 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 |||||| | || || || | ||||| ||||| ||||| |||||||| || |||| | Sbjct 4166 GCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTAC 4107 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | || || || || || |||||||| || || |||||||||| Sbjct 4106 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATG 4047 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108 | | |||||||| ||||||| |||| | || | |||||| | | ||| | || | Sbjct 4046 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 3988 Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168 || ||||||||||||||||||||||| || ||||| |||||||||||||||||| | Sbjct 3987 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCT 3929 Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 164228 ||||| || || || || |||||||| || | || || ||| || |||||||| | ||| Sbjct 3928 GTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGT 3869 Query 164229 CAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTG 164288 ||||| || || || | ||||| || || || ||||| || ||||| | ||| | Sbjct 3868 CAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATT 3809 Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348 || || || || ||||| || || || ||||| || || || ||| | || || ||||| Sbjct 3808 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 3749 Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408 ||||| ||||| || || |||||||| ||||| ||||| |||| |||||| || | Sbjct 3748 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 3689 Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468 | |||||||| |||| ||| ||| || | ||||||| ||||||||||| |||||| Sbjct 3688 AGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAA 3629 Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528 || || || ||||| || ||||| ||||| ||||| || ||||||||||||| || Sbjct 3628 ACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGT 3569 Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 |||||||| || ||||| || || |||||||| ||||| |||||||| || || || ||| Sbjct 3568 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 3509 Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648 || ||||| | ||| | ||| ||||| |||||| | || ||||| || |||||||| Sbjct 3508 TTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAA 3449 Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708 ||| | | ||| |||| |||||||| | || || ||||| || || | ||||| ||| Sbjct 3448 TCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCT 3389 Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768 || ||||||||||| ||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 3388 AACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 3329 Query 164769 Gc 164770 || Sbjct 3328 GC 3327 Score = 581 bits (644), Expect = 4e-161 Identities = 734/1003 (73%), Gaps = 4/1003 (0%) Strand=Plus/Minus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || |||||||||||||| |||||||| || || | || ||| Sbjct 31149 GATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTT 31090 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || || ||| | || | || |||||| |||| || || || || | || ||| Sbjct 31089 CCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGG 31030 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGT 165384 ||||||||||| ||||||||||| ||| | || || ||||| ||| | || || ||||| Sbjct 31029 TATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAA-CTTCTTAACCGCTGCAGT 30971 Query 165385 TTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCA 165444 ||| ||||| || | | | | || ||| | || | || ||||||||||| || || Sbjct 30970 TTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACA 30911 Query 165445 AGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGG 165504 || ||||| | | ||| || | || || || ||| ||||||| || |||||||| Sbjct 30910 GGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGG 30851 Query 165505 GGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTA 165563 ||||||| |||| ||||||||| | ||||| |||||| | || || ||| || | Sbjct 30850 TGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT- 30792 Query 165564 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 165623 | || || || ||||| || || ||||| ||||| || |||||||||||| || |||| Sbjct 30791 TGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTC 30732 Query 165624 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAA 165683 | || || || |||||||| || ||||||| || ||||| ||| || || ||||| | Sbjct 30731 TTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTA 30672 Query 165684 TCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATA 165743 | || | ||| | ||||| | |||||||| ||||| ||||| || || || ||||||| Sbjct 30671 TATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATA 30612 Query 165744 TGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAG 165803 ||||||| ||||| ||| | |||| | |||| | || | || || ||||||| || | Sbjct 30611 TGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCG 30552 Query 165804 TAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTA 165863 |||| |||||| | | | |||||||||| | ||||||||| ||| || ||| || | | Sbjct 30551 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 30492 Query 165864 CTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCG 165923 | |||| |||||||| || |||||||||||||| || || || ||||| || ||||| | Sbjct 30491 CCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTG 30432 Query 165924 GTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGG 165983 | |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | | Sbjct 30431 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTG 30372 Query 165984 GTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACT 166043 || | |||| ||| | | || | | ||| | || || ||| | ||||||||||||| Sbjct 30371 GTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACT 30312 Query 166044 TTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAA 166103 | || || ||||| ||| | ||||| ||||| || || ||||| || |||||||| |||| Sbjct 30311 TCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAA 30252 Query 166104 ACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGA 166163 | |||||||| || |||||| ||||||| ||| ||||| | ||||| || ||||| | Sbjct 30251 ATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAA 30192 Query 166164 ACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 || || | |||||||| || ||||| || | || ||||| || Sbjct 30191 ACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 >seq6 Length=19356003 Score = 271 bits (300), Expect = 8e-68 Identities = 318/430 (74%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 164340 GTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCT 164399 || ||||| ||||| ||||| || || |||||| | ||| | ||||| |||| |||||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 164400 TCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAA 164459 || | | |||||||| |||| ||| | || | |||||||| ||||||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 164460 GAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAA 164519 ||||||||||| || || ||||| || ||||| | || ||||| || ||||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 164520 TACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTT 164579 || || |||||||| || ||||| || | |||||||| ||||| |||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 164580 GGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAAC 164639 || || ||||| ||||| | ||| | ||| |||| |||||| | || ||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 164640 TTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTC 164699 |||||||| ||| | || ||| |||| |||||||| | || || ||||| || || | Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 164700 AACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTG 164759 ||||| ||| || ||||||||||| ||| | || ||||| ||||| || || ||| | Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTTA 3411193 Query 164760 GATCTCGCTG 164769 ||| | |||| Sbjct 3411194 GATTTAGCTG 3411203 >seq9 Length=31747250 Score = 199 bits (220), Expect = 4e-46 Identities = 232/313 (74%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 165638 GGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTTCCTT 165697 ||||| || ||||||| || ||||| ||| || || ||||| || || | ||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 165698 CTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGTTGCA 165757 ||||| | |||||||| ||||| ||||| || || || |||||||||||||| ||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 165758 GGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAATACTCTG 165817 ||| | |||| | |||| | || | || || ||||||| || ||||| |||||| | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 165818 TATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTACTCAAGAGGAAGAA 165877 | | |||||||||| | ||||||||| ||| || ||| || | || |||| ||| || Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 165878 ACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGT 165937 || || |||||||||||||| || || || ||||| || ||||| || |||| ||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 165938 AATAAGAGGTGGT 165950 ||||| | |||| Sbjct 26587302 AATAAACGTTGGT 26587290 >seq5 Length=30687117 Score = 109 bits (120), Expect = 6e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| ||||||||||| |||||||| || || |||| | ||||| ||||| ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 164502 GGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 164561 || || ||||||||||||| | ||||| | | |||| || || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 164562 GCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGC 164596 ||||| |||||||| || || || ||||| ||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq456 Length=558995 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 164494 GTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACT 164553 |||| ||||| || ||||||||||||| || |||||||| || ||||| || || | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 164554 TCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 ||||||| ||||| |||||||| || || || ||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556664611695000