Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq37374 554 5e-153 seq6 248 1e-60 >seq37374 Length=151683 Score = 554 bits (614), Expect = 5e-153 Identities = 717/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| ||||| | || | ||||| |||| ||||| ||||| || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 ||||| || |||||| || ||| | | ||| || ||| | || ||||| ||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | ||||||||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 ||||| || ||||| || |||| |||| || || ||| | || || || || || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||||||| | | ||||| |||||||| || || |||||||| | | | | Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || |||||||||| | |||||||| ||| | | Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC- 3955 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 3954 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 3895 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 | || ||| | | || || ||||||| || || || ||||||||||||||||||| Sbjct 3894 CTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 3835 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 ||||||| || ||||| || ||| | ||||| || || ||||| || ||||||||||||| Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || |||||| || ||||||| Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | ||||| || | | Sbjct 3714 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| || |||||||| |||||||| ||||||||||| || || ||||| || || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||||||||||||||| || | | | || |||||||||| Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| || | |||||| | || ||||| |||| Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCA 3475 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 |||| || || ||||| || |||||||| || || ||| | | ||| | || || Sbjct 3474 ACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATA 3415 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct 3414 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 3355 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| || ||||| ||||| |||| Sbjct 3354 CTCATAATTTCCCTCTAGATCTAGC 3330 >seq6 Length=19356003 Score = 248 bits (274), Expect = 1e-60 Identities = 314/430 (73%), Gaps = 4/430 (1%) Strand=Plus/Plus Query 169046 GTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCT 169105 ||||| ||| | ||||| || || |||||| | ||| ||||||| | ||||| ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 169106 TCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAA 169165 | | || || || || || || | |||| | || | |||||||| || |||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 169166 GAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAG 169225 ||||||||||| ||||||||||| || || |||| || || || |||| |||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 169226 TATGCAAGTTTCAACAACTCAAGAAGTCTTCAC--TTCTTCCTAGCAGTGTTCCCAGTTG 169283 ||||||||||||||||| || | |||| || ||||||||||| | | || | | Sbjct 3410954 TATGCAAGTTTCAACAATTCTCG--TTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 169284 TATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTA 169343 || || | ||||| ||| || | |||||| | || |||| |||||||| || || |||| Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 169344 ACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTAC 169403 | || |||||||| || | ||| | | ||| | || ||| |||| ||| | Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTA 3411131 Query 169404 TTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCAC 169463 ||||| |||| ||||||||||||||||||||| |||| ||||| ||||| || || || Sbjct 3411132 TTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTT 3411191 Query 169464 TAGACTTAGC 169473 |||| ||||| Sbjct 3411192 TAGATTTAGC 3411201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564177899940000