Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq37374 553 2e-152 seq6 232 7e-56 seq9 206 3e-48 seq5 104 3e-17 seq456 91.5 2e-13 >seq37374 Length=151683 Score = 553 bits (612), Expect = 2e-152 Identities = 721/990 (73%), Gaps = 8/990 (1%) Strand=Plus/Minus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 |||||||| ||| | ||| | ||||| ||||| || || |||| || ||||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 ||||| |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 |||||||| || || ||||||| ||| | || ||||| ||||||| |||| | || Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCG 162743 | |||||| | | || | | ||||||||| ||||| |||||||| || || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 3954 Query 162744 TCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGG 162802 ||| ||||||||||| ||||| ||| || ||||| || || ||||||||||| || | | Sbjct 3953 TCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 3895 Query 162803 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 162862 | || ||| || |||||||| | |||||||| || || || | ||||| | || | Sbjct 3894 CTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 3835 Query 162863 TCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATC 162922 | |||||| ||||| | ||| |||| || || || ||||| || ||||| ||||||| Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 162923 CCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACG 162982 | || |||||||| ||||| || ||||| ||||| || || || |||||||| ||||| | Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 162983 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 163042 |||| ||||| || ||| | || | || || || |||| ||| || || | | Sbjct 3714 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 163043 GTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCG 163102 |||||| || |||||||| ||||| || || || || || || || |||||||| || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 163103 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 163162 | || |||||||||||||||||| |||||||| || ||||| || || |||||||| | Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 163163 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATT 163220 |||| |||||||| || || || ||||| ||||| | || | ||| || ||||| || Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGG--TATCAGCACTATGGCTTT 3477 Query 163221 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 163280 |||| | || ||||| || |||||||| ||| | ||||| |||| |||||||| | || Sbjct 3476 CAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAA 3417 Query 163281 CACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAA 163340 |||||||| || || | ||||| || | ||||||||||| ||||| || || || Sbjct 3416 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 3357 Query 163341 TGCTCACAACTTCCCACTTGACCTGGCAGC 163370 |||||| || ||||| || || || || || Sbjct 3356 TGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 511 bits (566), Expect = 5e-140 Identities = 733/1023 (72%), Gaps = 10/1023 (1%) Strand=Plus/Minus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || |||||||| ||| | |||||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || |||| |||| || ||| | || | || || ||| |||| ||||| || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGG-TGCTAATTTTCT 163799 || || || ||||| || || || |||||| ||| ||| | || || ||| | || | | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCT-T 30983 Query 163800 CACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 163858 || || || || || || || ||| | | | | || ||| || || || || |||| Sbjct 30982 AACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCT-TTGTTGTTACTGTGGG 30924 Query 163859 GTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTG 163918 ||||||| || ||||| ||||| ||| ||| || | || || || |||| ||||| Sbjct 30923 GTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTG 30864 Query 163919 TGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTC 163978 | || |||||||| || || | | || ||||||||| | || |||||||||||||||| Sbjct 30863 TTGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 30804 Query 163979 GC-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTC 164037 | ||| || | | |||| || ||||| || || ||||| ||||| |||||||| || Sbjct 30803 GATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTT 30745 Query 164038 GTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTT 164097 ||| ||| ||||| || || || |||||||| || |||||||||| ||||| |||| Sbjct 30744 GTTTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTT 30685 Query 164098 GGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTG 164157 || || ||||| || || ||||| || | || | |||||||||||||| ||||| || Sbjct 30684 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTA 30625 Query 164158 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATT 164217 ||||| || ||||||||||||||||||||| || | |||| ||| | |||| |||||| Sbjct 30624 AACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATT 30565 Query 164218 CACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAG 164277 || || | || || |||||||| || | ||||||||| || ||||| || || Sbjct 30564 CATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 30505 Query 164278 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 164337 || ||| | | || || | ||||| |||||||| ||||| ||||| || ||||| ||| Sbjct 30504 GCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGG 30445 Query 164338 TCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 164397 || || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 30444 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 30385 Query 164398 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 164457 || || || | ||| |||||| || |||| | | || | || || || | Sbjct 30384 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTA 30325 Query 164458 CGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACT 164517 |||||||| || || || |||||| || | ||||| ||||||||||| || |||||| Sbjct 30324 CGTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACT 30265 Query 164518 TTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGAC 164577 ||||| ||||| || || | || |||||||| | ||||| ||| | ||| | || Sbjct 30264 TTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGAT 30205 Query 164578 CAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTT 164635 |||| || || ||| || | ||||| || || || || || | || || || |||| Sbjct 30204 CAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTT 30147 Query 164636 AAT 164638 ||| Sbjct 30146 AAT 30144 >seq6 Length=19356003 Score = 232 bits (256), Expect = 7e-56 Identities = 304/419 (73%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 162939 TGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATC 162998 ||| || ||||| ||||| || || || |||||| | ||| | ||||| ||||| || || Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 162999 TTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCA 163058 | | | | || || || |||| ||| | || | |||||||| || ||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 163059 AGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCA 163118 ||||||||| || || || || || || || |||| || || || || ||||||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 163119 ATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGT 163178 ||||||| |||||||| || ||||| || | |||||||| ||||| |||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 163179 CGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTC 163236 || || ||||| |||| ||| || ||| || |||| |||||| | || ||||| Sbjct 3411013 AGGTATTTGGTTTACCG--CTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTT 3411070 Query 163237 AACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTT 163296 || |||||||| ||| | ||||| |||| |||||||| | || |||||||| || || Sbjct 3411071 AATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATT 3411130 Query 163297 CTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCC 163355 | ||||| || | ||||||||||| ||| | || || |||||||| || || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq9 Length=31747250 Score = 206 bits (228), Expect = 3e-48 Identities = 233/312 (75%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 164065 GGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTC 164124 ||||| || |||||||||| ||||| |||||| || ||||| || || ||||| || Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 164125 TTATTCCTTCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCT 164184 | || | |||||||||||||| ||||| || ||||| || |||||||||||||||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 164185 GGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTG 164244 ||| || | |||| ||| | |||| |||||||| || | || || |||||||| || Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 164245 TATGAAGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAG 164304 | ||||||||| || ||||| || || || ||| | | || || | ||| | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 164305 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCT 164364 |||||||| ||||| ||||| || ||||| ||||| || ||||| || |||| ||||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 164365 AACAAGCGGTGG 164376 || || || ||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq5 Length=30687117 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 163042 GGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTC 163101 ||||||| || |||||||| ||||| || || || || | | || |||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 163102 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 163161 || || ||||||||||||||| || ||||| | | |||| || || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 163162 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 163196 ||||| |||||||| || || || ||||| ||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq456 Length=558995 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 163094 GTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACT 163153 |||| || || || |||||||||||||||||| |||||||| || ||||| || || | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 163154 TCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 163188 ||||||| ||||| |||||||| || || || ||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557323503725000