Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq37374 605 3e-168 seq9 183 3e-41 seq6 165 9e-36 seq5 82.4 9e-11 >seq37374 Length=151683 Score = 605 bits (670), Expect = 3e-168 Identities = 737/1002 (74%), Gaps = 2/1002 (0%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| |||||||||||||| |||||||| || || | || ||| Sbjct 31149 GATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTT 31090 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || || ||| | || | || |||||| |||| || || | || || || ||| Sbjct 31089 CCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGG 31030 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 ||||||||||| ||||||||||| ||| | || ||| ||||| | || || |||||| Sbjct 31029 TATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTT 30970 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 ||||| || || | | | || ||| | || | || ||||||||||| ||||| Sbjct 30969 TCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAG 30910 Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794 || ||||| | | |||||||| | || || || ||| ||||||| || |||||||| Sbjct 30909 GGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGT 30850 Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853 ||||||| |||| ||||||||| | ||||| |||||||| || || ||| || | | Sbjct 30849 GCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 30791 Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913 || || || ||||| || || ||||| ||||| || |||||||||||| || ||||| Sbjct 30790 GCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCT 30731 Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973 || || || |||||||| || ||||||| || ||||| ||| || || |||| || Sbjct 30730 TATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTAT 30671 Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033 || |||||| | ||||| | |||||||| ||||| |||||| | || ||||||||||| Sbjct 30670 ATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATAT 30611 Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093 |||||| || || ||| | ||||| | || | || | || |||||||||| || || Sbjct 30610 GATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGT 30551 Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153 ||| |||||| | | | |||||||||| |||||||| ||| || ||| || || Sbjct 30550 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 30491 Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213 || | || || || ||||||||||||||||| || || || ||||| || |||||||| Sbjct 30490 CCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGG 30431 Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273 |||| || ||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 30430 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGG 30371 Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333 | | |||| ||| | | || | | ||| | || || ||| | |||||||||||||| Sbjct 30370 TTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTT 30311 Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393 ||||| ||||| ||| | ||||| |||||||| || |||||||| ||||||||||| || Sbjct 30310 CGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 30251 Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453 || ||||| ||||||||| ||||||| ||| | ||| || ||||| |||||||| || Sbjct 30250 TATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAA 30191 Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 | || | ||||||||||| || || || || || || || || Sbjct 30190 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 Score = 533 bits (590), Expect = 2e-146 Identities = 707/988 (72%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| || ||||| | |||||||| | || ||||| || | || ||||| || ||| | Sbjct 4313 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4254 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||| ||||| || | | ||||| ||||| || || ||||| || ||| ||| | Sbjct 4253 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4195 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || || ||| |||| || || | ||||| |||| Sbjct 4194 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4135 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | ||||| |||||||| || ||||| ||||| ||||| ||| | || || ||||| | Sbjct 4134 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4075 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | ||||||||||| | | || || ||||| ||||| || ||||||| |||| | | Sbjct 4074 TATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 4015 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||| |||||||||||||||||||| || | Sbjct 4014 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 3955 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| ||||||||||| ||||| ||||||||| || ||||| || || || || ||| Sbjct 3954 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 3895 Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565 |||| ||| | |||||||| | |||||||| || || || | |||||||| || | Sbjct 3894 CTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 3835 Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625 | |||||||| ||||| | ||| |||| || || || ||||| || || || ||||| | Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685 | || || ||| | || || ||||| ||||||||||| || || |||||||| ||||| | Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745 |||| |||| || ||| || | | |||||||| |||| ||| ||| || | | Sbjct 3714 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805 |||||| || ||||| || ||||| || ||||| || || |||||||||||||| || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865 | || ||||||||||||| ||| |||||||| || || || | || |||||| | | Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925 | || |||||||| || ||||| |||| |||| Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCA 3475 Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985 || | || ||||| || |||||||| || | |||||||| ||| || | || Sbjct 3474 ACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATA 3415 Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045 | ||||| || | | ||||| ||| || ||||||||||| ||||| || ||||||| Sbjct 3414 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 3355 Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGC 168073 |||| || |||||||| || || ||||| Sbjct 3354 CTCATAATTTCCCTCTAGATCTAGCTGC 3327 >seq9 Length=31747250 Score = 183 bits (202), Expect = 3e-41 Identities = 218/296 (74%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 168927 GGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTT 168986 ||||| || ||||||| || ||||| ||| || || |||| || || |||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 168987 CTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCA 169046 ||||| | |||||||| ||||| |||||| | || ||||||||||||||||| || || Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 169047 GGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTCTG 169106 ||| | ||||| | || | || | || |||||||||| || ||||| |||||| | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 169107 TATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCACTCAGGAAGAGGAG 169166 | | |||||||||| |||||||| ||| || ||| || || || | || | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 169167 ACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTT 169222 || ||||||||||||||||| || || || ||||| || |||||||| |||| || Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTT 26587307 >seq6 Length=19356003 Score = 165 bits (182), Expect = 9e-36 Identities = 289/430 (67%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 167643 GTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCT 167702 || ||||| ||||||||||| || || |||||| | ||| | ||||| |||| || ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 167703 TCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAG 167762 || | | |||||||| |||| ||| | || | |||||||| || ||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 167763 GAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAA 167822 |||||||| || ||||| || || |||||||||| || || || || ||||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 167823 TACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTT 167882 || ||| |||||||| || || || | | |||||| | || || |||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 167883 GGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAAC 167942 ||||| |||| |||||| | || ||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 167943 TTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTC 168002 |||||||| || | |||||||| ||| || | ||| ||||| || | | Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 168003 AACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTC 168062 ||||| ||| || ||||||||||| ||| | || ||||||||||| || || ||| | Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTTA 3411193 Query 168063 GACCTTGCTG 168072 || | |||| Sbjct 3411194 GATTTAGCTG 3411203 >seq5 Length=30687117 Score = 82.4 bits (90), Expect = 9e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 167745 GGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTC 167804 ||||||| || ||||| || ||||| || ||||| || | ||||||||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 167805 GGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTG 167864 || || ||||||||||||| || ||||| | | || | | || ||||| | Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 167865 GCAGCATGGCCTGTTGTTGGTATCTGGT 167892 || || |||||||| || ||||| |||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGT 28538890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560346090950000