Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq37374 461 1e-124 seq6 167 3e-36 >seq37374 Length=151683 Score = 461 bits (510), Expect = 1e-124 Identities = 681/965 (71%), Gaps = 0/965 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 || || |||||| | ||| |||| ||||||||||| | ||||||||| | | | Sbjct 4291 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACT 4232 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || || |||||||| ||||| || ||||| || || || Sbjct 4231 GCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATT 4172 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | ||||| ||||| ||||| |||||||| || | Sbjct 4171 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATT 4112 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || || || || || || || || || ||||||||||| | ||||| Sbjct 4111 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGAT 4052 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 4051 GAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 3992 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 3991 GCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 3932 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | || || ||| || ||| | | ||||| | Sbjct 3931 GCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATT 3872 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || ||||| ||||| || ||||| | ||| Sbjct 3871 GGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 3812 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||| ||||| |||||||||||||| ||| Sbjct 3811 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCT 3752 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| || || | ||| ||| ||||| ||||| | || || ||| | | Sbjct 3751 GGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 3692 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | ||||| || | ||||||| || || |||||||| Sbjct 3691 ATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAA 3632 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| ||| Sbjct 3631 GAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCA 3572 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | |||| Sbjct 3571 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATT 3512 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || |||||||| |||||| | || ||||| || |||||| Sbjct 3511 TGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAAC 3452 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || || ||| ||||| || || ||||| || Sbjct 3451 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGA 3392 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||||||||| || ||||| ||||| || ||||| |||| | Sbjct 3391 GCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTA 3332 Query 216275 GCTGC 216279 ||||| Sbjct 3331 GCTGC 3327 >seq6 Length=19356003 Score = 167 bits (184), Expect = 3e-36 Identities = 298/433 (69%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 215848 TGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATC 215907 ||| |||||||| ||||| || || | ||| | | ||| | ||||| | || || || Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 215908 TTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACA 215967 | | | || || || || || || | |||| | || | |||||||| || || || Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 215968 AGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCA 216027 ||| || ||||| || || || |||||||| || | || ||||| || | |||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 216028 ATACGCATCTTTCAACAACTCAAGAAGTCTTCAC--TTCTTCCTTGCAGCATTCCCTGTT 216085 ||| ||| ||||||||| || | |||| || |||||||| || || | ||| | Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCG--TTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATA 3411010 Query 216086 ATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTC 216145 | |||| ||| || || | ||| || ||||||| |||||| | || ||||| Sbjct 3411011 GTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTT 3411070 Query 216146 AACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTT 216205 || |||||||| || || | || ||| || || ||| ||||| || || Sbjct 3411071 AATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATT 3411130 Query 216206 CTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCA 216265 ||||| |||| |||||||||||||||||| | || ||||| ||||| || || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCT 3411190 Query 216266 TTAGACTTGGCTG 216278 ||||| || |||| Sbjct 3411191 TTAGATTTAGCTG 3411203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744733507190000