Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq37374 603 1e-167 seq6 192 7e-44 seq9 187 3e-42 seq10 98.7 1e-15 seq5 84.2 2e-11 >seq37374 Length=151683 Score = 603 bits (668), Expect = 1e-167 Identities = 718/969 (74%), Gaps = 6/969 (1%) Strand=Plus/Minus Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843 |||| | || |||||||| | || ||||| |||||| | ||||| || ||| | | Sbjct 4292 CACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGAC 4233 Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902 || || | ||| ||||||| || || |||||||| || || || || |||||||||| Sbjct 4232 TGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTA 4174 Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962 ||||||| ||||| | || |||||| | || || ||||| ||||| |||||||| | Sbjct 4173 TTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTA 4114 Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022 |||| ||||| || || || | || || ||||| || |||||||| || | | | Sbjct 4113 TTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTG 4054 Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082 |||||||||| |||||||| |||||||| | | |||| | |||||| | | |||| Sbjct 4053 ATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 3994 Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGA 165142 ||||||||||||||||||||||||||||||| || || || |||||||||||||||| Sbjct 3993 TAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 3934 Query 165143 TTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTT 165202 || || |||||| || ||||| || || ||| | || |||||| || |||||||| Sbjct 3933 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTA 3874 Query 165203 TCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 165262 | |||||||| || || || |||||||||||||| || || ||||||||||| || | || Sbjct 3873 TTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTA 3814 Query 165263 TGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTG 165322 || | || || || || || ||||| |||||||||||||| || |||||| | || || | Sbjct 3813 TGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAG 3754 Query 165323 CTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCAC 165382 |||| |||||||| || || || ||| |||||||||||| | || ||||| Sbjct 3753 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTT 3694 Query 165383 TCGTCCGCGAGACAACTGAAACAGAGAGTCAG--AACTACGGTTATAAGTTTGGACAAGA 165440 | || | || || || ||| | || || | || | ||||| | ||||| ||||| Sbjct 3693 TGATCAGGGAAACCACAGAA--AATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGA 3636 Query 165441 AGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATA 165500 ||||| || ||||| || || ||||| || || || || || || | || |||||||| Sbjct 3635 GGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 3576 Query 165501 CGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGG 165560 ||| ||||||||||| ||||| | || |||||||| || || ||||||||||| || Sbjct 3575 TGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGG 3516 Query 165561 TATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTT 165620 ||| ||||| || ||| | ||| | ||||| ||||| |||||| | || ||||| || || Sbjct 3515 TATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTT 3456 Query 165621 CAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAA 165680 |||||| || | ||||||||||| | || ||| |||||||| || | || Sbjct 3455 CAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAA 3396 Query 165681 CCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGA 165740 ||| ||| || ||||||||||| |||||||| ||||| ||||| || ||||| || || Sbjct 3395 CCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGA 3336 Query 165741 CCTCGCTGC 165749 || ||||| Sbjct 3335 TCTAGCTGC 3327 Score = 562 bits (622), Expect = 3e-155 Identities = 721/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || |||||||||||||| |||||||| || || | || |||| || ||| | || Sbjct 31131 GACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTCGCC 31072 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| | || || || || || || || ||||||||||| || | ||| Sbjct 31071 TTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTGGCA 31012 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || |||| | || || ||||| ||| | || || |||||||| ||||| || || Sbjct 31011 AGTTCTTATTTAGAAGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAG 30953 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | || ||| | | | || ||||||||||| || || || ||||| | | || Sbjct 30952 TTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTG 30893 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| || | || || || ||| | ||||||||||||||||||||||| | |||| || Sbjct 30892 GTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGG 30833 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 30832 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 30774 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 |||| || || ||||| |||||||| || ||| ||| ||||| || || || ||||||| Sbjct 30773 TCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTTATTTATCCACTGGGTC 30714 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || ||||| ||| || || |||| || || |||||| |||| | Sbjct 30713 AGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCT 30654 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | |||||||| || || |||||| | |||||||||||||||||||| || || ||| Sbjct 30653 TTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTG 30594 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | |||| | || | || || ||||||| || ||||| || ||| | | | Sbjct 30593 TATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTG 30534 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| |||||||| ||| || || || | || |||| |||||||| | Sbjct 30533 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTT 30474 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 ||||||||||||| || || |||| |||||| || ||||| || |||| ||| |||| Sbjct 30473 ATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATA 30414 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 30413 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTC 30354 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | ||| | || || ||| | |||||||||||||| ||||| |||||| | Sbjct 30353 TTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATCC 30294 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||| ||||| || |||||||| || || | Sbjct 30293 GCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAG 30234 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| | ||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 30233 GTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 30174 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 30173 AGGTTCTACCACGTGGAAACGCTCTTTAA 30145 >seq6 Length=19356003 Score = 192 bits (212), Expect = 7e-44 Identities = 231/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 165421 GGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTC 165480 ||||| || ||||| ||||||||||| || ||||| || || ||||| || | || || Sbjct 3410876 GGTTACAAATTTGGTCAAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTT 3410935 Query 165481 GGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 165540 || || | || |||||||| ||| ||||||||||| ||||| | | |||||||| Sbjct 3410936 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTA 3410995 Query 165541 GCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 165600 || || |||||| |||| ||||| ||||| || ||| | ||| | ||||| |||| ||| Sbjct 3410996 GCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTC 3411055 Query 165601 AACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCT 165660 ||| | || ||||| || |||||||| || | |||||||||| | || | Sbjct 3411056 AACTTAAATGGTTTTAATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAAT 3411115 Query 165661 ACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 165720 || |||||||| || | ||||| ||| || ||||||||||| ||| |||| ||||| Sbjct 3411116 ACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAAT 3411175 Query 165721 GCTCACAACTTCCC 165734 ||||| || || || Sbjct 3411176 GCTCATAATTTGCC 3411189 >seq9 Length=31747250 Score = 187 bits (206), Expect = 3e-42 Identities = 229/313 (73%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 166605 GGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTC 166664 ||||| || ||||||| || ||||| ||| || || |||| || || |||||| || Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 166665 CTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCA 166724 || || | |||||||| || || |||||| | |||||||||||||||||||| || || Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 166725 GGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTG 166784 ||| | | || | |||| | || | || || ||||||| || ||||| || ||| | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 166785 TATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAA 166844 | | |||||||||| |||||||| ||| || || || | || |||| ||| || Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 166845 ACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGT 166904 || |||||||||||||| || || |||| |||||| || ||||| || |||| ||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 166905 AATAAGAGGTGGT 166917 ||||| | |||| Sbjct 26587302 AATAAACGTTGGT 26587290 >seq10 Length=40424437 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/229 (70%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 164887 GTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATC 164946 || || |||||| |||||| | | || | | || |||||| | || || ||||| ||| Sbjct 28818817 GTAGATATTGATAGTATTCATAAGTCTCTTTCTGGATCTCTACTTTATGGAAACAATATC 28818876 Query 164947 ATCTCTGGTGCT----GTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || | |||||| ||| || ||| | |||| | || | || || ||||| | Sbjct 28818877 ATTTGTGGTGCAAATAGTCCTTACGTATG-TAACTGTA--GGTTTGCATTTTTATCCAAC 28818933 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTA---CAACGGTGGTCCTTACCAGTTGGT 165059 | |||||| || | | |||||||||| || ||||||||||||||| | | | Sbjct 28818934 CTAGGAAGCAGCTTCTGTTGATGAATGGTGGTTATGCAACGGTGGTCCTTATGAACTAAT 28818993 Query 165060 TGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGG 165108 ||| | |||||| | | |||||||||| ||||||||||||||||||| Sbjct 28818994 TGTTCTACACTTCTTATTTGGTGTAGCTTACTACATGGGTCGTGAGTGG 28819042 >seq5 Length=30687117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 165421 GGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTC 165480 ||||| | ||||| ||||| ||||| || ||||| || | |||| || || || || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 165481 GGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 165540 || || | || |||||||| || ||||| | || |||| | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 165541 GCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCT 165576 || || ||||||||||| ||||| ||||| || ||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCT 28538898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563397464720000