Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq37374 524 9e-144 seq6 203 4e-47 seq5 86.0 7e-12 >seq37374 Length=151683 Score = 524 bits (580), Expect = 9e-144 Identities = 698/970 (72%), Gaps = 0/970 (0%) Strand=Plus/Minus Query 169697 ATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCC 169756 ||||| |||| ||||| | || || | || |||| ||||| ||||| |||||||| | Sbjct 4305 ATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTC 4246 Query 169757 CATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGG 169816 | | |||| | ||| | | ||||| | ||||| ||||| || || || || | Sbjct 4245 CTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAG 4186 Query 169817 ACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCT 169876 | || ||||| || | || ||||| | || || | | ||||| ||||| ||||| | Sbjct 4185 ATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTT 4126 Query 169877 CTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAG 169936 ||||||| || |||| |||| || || ||| | || || ||||| || ||||||| Sbjct 4125 CTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAG 4066 Query 169937 CAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACT 169996 |||| || | ||||| ||||| || ||||| ||||||||| || || || | | |||| Sbjct 4065 CAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACT 4006 Query 169997 TCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTA 170056 || | | || | || |||||||||| | |||||||||| | ||| | |||| Sbjct 4005 TCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTA 3946 Query 170057 TGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCT 170116 ||||||||||||| ||| |||||||| ||||| || |||| || ||||| |||| Sbjct 3945 TGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCT 3886 Query 170117 TAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTA 170176 | | |||||| | ||||| ||| || || || || ||||||||||| || || |||| Sbjct 3885 TGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTA 3826 Query 170177 CATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATA 170236 | || || || ||| | ||||| || || ||||| || ||||||||||| ||||| || | Sbjct 3825 CTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACA 3766 Query 170237 TGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTG 170296 || ||| || |||||| | ||||| || | || ||| || ||||| ||||| | | Sbjct 3765 TGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGG 3706 Query 170297 TAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAAT 170356 |||| ||| | | ||||| || || ||||| || || || || | || |||| || Sbjct 3705 TAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGAT 3646 Query 170357 TCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTA 170416 | || ||||| |||||||| || || ||||| || || ||||| || ||||| || | | Sbjct 3645 TTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGA 3586 Query 170417 TCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCC 170476 ||||||||||||| || || |||||| |||| | | || |||||||| ||| | | | Sbjct 3585 TCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGC 3526 Query 170477 CTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATG 170536 |||||||| | || ||||| || | | ||||| |||| ||||| || ||| | |||| Sbjct 3525 CTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATG 3466 Query 170537 GATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAG 170596 | ||||| |||||||| || | || ||| | ||| ||| | ||| ||||| | Sbjct 3465 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 3406 Query 170597 ACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACT 170656 | || ||||| |||| ||||| |||||||||||||||||||| |||||||| || || | Sbjct 3405 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATT 3346 Query 170657 TCCCACTTGA 170666 |||| || || Sbjct 3345 TCCCTCTAGA 3336 >seq6 Length=19356003 Score = 203 bits (224), Expect = 4e-47 Identities = 297/418 (71%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 170245 GTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCT 170304 || |||||| | ||||| || | || ||| | ||| | ||||| | ||||| ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 170305 TCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGGACAA 170364 | | || || || || ||||| || || | || | || |||||||| || ||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 170365 GAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAA 170424 ||||||||||| || || ||||| || || |||| || ||||| || | ||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 170425 TATGCTAGCTTTAACAATAGTCGTAGTCTTCAC--TTCTTCCTTGCTACATTCCCTGTAG 170482 ||||| || || |||||| |||| |||| || |||||||| ||| | | ||| ||| Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGT--TCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 170483 TATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTA 170542 || | || ||||| || | | ||||| |||| |||| || ||| | ||||| |||| Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 170543 ACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTC 170602 | |||||||| || | | ||| | ||| ||| | ||| ||||| || || Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTA 3411131 Query 170603 TTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCC 170660 ||||| |||| ||||| ||||||||||||||| |||| |||||||| || || || || Sbjct 3411132 TTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 170347 GGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTT 170406 || |||| ||| || ||||| |||||||| || || |||| | || ||||| || ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 170407 GGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTT 170466 || || | |||||||||||| | || || || | | |||| | | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 170467 GCTACATTCCCTGTAGTATGCATCTGGTTAAC 170498 ||| | | ||||||||| | || ||||| || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTAC 28538894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582575700700000